RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	BLVRA	P53004	296 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	CRYBA2	P53672	197 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	KRTAP10-12	P60413	245 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	CKAP4	Q07065	602 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	STX3	Q13277	289 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ECSCR	Q19T08	205 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	RPEL1	Q2QD12	228 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	DEFB114	Q30KQ6	69 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	PAGE3	Q5JUK9	113 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	CLVS2	Q5SYC1	327 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	CFAP161	Q6P656	301 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	TBPL2	Q6SJ96	375 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF497	Q6ZNH5	498 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ASRGL1	Q7L266	308 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686		Q8IYB0	196 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	MREG	Q8N565	214 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	EIF1AD	Q8N9N8	165 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR8B12	Q8NGG6	310 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR52B4	Q8NGK2	314 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	RNF133	Q8WVZ7	376 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	SPDL1	Q96EA4	605 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	RSRC1	Q96IZ7	334 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	MS4A10	Q96PG2	267 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	SPACA5	Q96QH8	159 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	SORT1	Q99523	831 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	RARRES2	Q99969	163 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	SRSF8	Q9BRL6	282 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	C20orf27	Q9GZN8	174 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	C11orf68	Q9H3H3	251 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	ANKRD19P	Q9H560	264 aa		4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	CNOT2	Q9NZN8	540 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	FLG2	Q5D862	2391 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-223	ENST00000553686	TRAV10	A0A0B4J240	114 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	PQLC2L	A1A4F0	135 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	TXNL1	O43396	289 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	SOX15	O60248	233 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	E2F6	O75461	281 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	SCGB1D1	O95968	90 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	SCT	P09683	121 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	NCK1	P16333	377 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	BLVRB	P30043	206 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	PYCR1	P32322	319 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	OPRL1	P41146	370 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	YAP1	P46937	504 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR3A1	P47881	315 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	GNG10	P50151	68 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	KRTAP10-5	P60370	271 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	AES	Q08117	197 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	TMEM187	Q14656	261 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF146	Q15072	292 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	C17orf58	Q2M2W7	97 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	AKIRIN2	Q53H80	203 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	ACTBL2	Q562R1	376 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	KRBOX4	Q5JUW0	171 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	SPIN3	Q5JUX0	258 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	FFAR4	Q5NUL3	377 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686		Q5VSD8	79 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	CD200R1L	Q6Q8B3	271 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	COMMD2	Q86X83	199 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	TMEM104	Q8NE00	496 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR10A7	Q8NGE5	316 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	CASTOR1	Q8WTX7	329 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	LEAP2	Q969E1	77 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZNF251	Q9BRH9	671 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	KAT8	Q9H7Z6	458 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	ZC4H2	Q9NQZ6	224 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	IDI2-AS1	Q9NZ38	188 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	MTCH1	Q9NZJ7	389 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	PEF1	Q9UBV8	284 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	NUBP2	Q9Y5Y2	271 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686		U3KQV3	271 aa		4.23	□□□□□ -1.73
ATXN3-223	ENST00000553686	IGLV2-18	A0A075B6J9	118 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A0B4J203	849 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686		A0A0U1RQV5	110 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	ACOD1	A6NK06	481 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	CYB5A	P00167	134 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	SHBG	P04278	402 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	CSN2	P05814	226 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	AADAC	P22760	399 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	HTR1F	P30939	366 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	CASQ1	P31415	396 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	MAP2K4	P45985	399 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	FXYD6P3	P58550	94 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	C5orf64	Q2M2E5	130 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	UTF1	Q5T230	341 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	UNQ5815/PRO19632	Q6UWF5	114 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	DLEU7	Q6UYE1	221 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	SPATA12	Q7Z6I5	190 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	CYP4Z1	Q86W10	505 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	UBE2DNL	Q8IWF7	75 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	LYPD1	Q8N2G4	141 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR13C5	Q8NGS8	318 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	OR10A6	Q8NH74	314 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	MRGPRD	Q8TDS7	321 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	TPD52L3	Q96J77	140 aa		4.22	□□□□□ -1.73
ATXN3-223	ENST00000553686	CGREF1	Q99674	301 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms