RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 GLIPR1P48060 266 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 VAMP2P63027 116 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 ID3Q02535 119 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 WFDC8Q8IUA0 241 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 DRAM1Q8N682 238 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 SMIM3Q9BZL3 60 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 C11orf1Q9H5F2 150 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 IL19Q9UHD0 177 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 ZDHHC8Q9ULC8 765 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 IGKV1D-17A0A075B6S4 117 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 NUDT19A8MXV4 375 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 SPINT2O43291 252 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 ZNF737O75373 536 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 LHBP01229 141 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 FAM157CP0CG43 387 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCD4-218ENST00000553486 MSMO1Q15800 293 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 OR2C3Q8N628 320 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
ABCD4-218ENST00000553486 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
ABCD4-218ENST00000553486 ARL11Q969Q4 196 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 ERGIC1Q969X5 290 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
ABCD4-218ENST00000553486 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 SLC25A31Q9H0C2 315 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 PARP12Q9H0J9 701 aaKnown RBP12.79□□□□□ -0.36
ABCD4-218ENST00000553486 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 ZFHX3Q15911 3703 aa12.79□□□□□ -0.36
ABCD4-218ENST00000553486 RAB19A4D1S5 217 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 WRBO00258 174 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 MGST3O14880 152 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-218ENST00000553486 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-218ENST00000553486 OR1S2Q8NGQ3 325 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 OR13A1Q8NGR1 328 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 RND1Q92730 232 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 LINC00052Q96N35 136 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-218ENST00000553486 LGALS8O00214 317 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 SSSCA1O60232 199 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 ADH4P08319 380 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 ZNF16P17020 682 aaPredicted RBP12.78□□□□□ -0.36
ABCD4-218ENST00000553486 GZMHP20718 246 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 HTD2P86397 168 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 LPAR3Q9UBY5 353 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 NUP50Q9UKX7 468 aa12.78□□□□□ -0.36
ABCD4-218ENST00000553486 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 IGHV1-46P01743 117 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 SULT1A2P50226 295 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 CAV2P51636 162 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 KRTAP10-9P60411 292 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 EDDM3AQ14507 147 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 UQCC3Q6UW78 93 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 TPRX1Q8N7U7 411 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 OR2D2Q9H210 308 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 C2CD3Q4AC94 2353 aa12.77□□□□□ -0.37
ABCD4-218ENST00000553486 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 ABCD4O14678 606 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 PITX3O75364 302 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 EPHA1P21709 976 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 BLOC1S1P78537 153 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 EWSR1Q01844 656 aaKnown RBP eCLIP12.76□□□□□ -0.37
ABCD4-218ENST00000553486 NHLH2Q02577 135 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 TLE4Q04727 773 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 CATR1Q13166 79 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 ZNF585BQ52M93 769 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
ABCD4-218ENST00000553486 DIRC2Q96SL1 478 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 MAGT1Q9H0U3 335 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
ABCD4-218ENST00000553486 RNF150Q9ULK6 438 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 ODAMA1E959 279 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 DPRXA6NFQ7 191 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 VSTM5A8MXK1 200 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 K7N7A8 449 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 FBXO24O75426 580 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 CRYZL1O95825 349 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 SSTR5P35346 364 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 PPP1CCP36873 323 aaKnown RBP12.76□□□□□ -0.37
ABCD4-218ENST00000553486 AKR1C2P52895 323 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 CR1LQ2VPA4 569 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 STPG2Q8N412 459 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
ABCD4-218ENST00000553486 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms