RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 Q8WTZ3 238 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 RAB8BQ92930 207 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 SLC25A44Q96H78 314 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-209ENST00000553280 C8orf76Q96K31 380 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 UCK1Q9HA47 277 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 HRASLSQ9HDD0 168 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 BABAM2Q9NXR7 383 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 POLR1DQ9Y2S0 133 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 COL4A4P53420 1690 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-209ENST00000553280 YLPM1P49750 1951 aaKnown RBP2.65□□□□□ -1.99
SCFD1-209ENST00000553280 THADAQ6YHU6 1953 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 PLB1Q6P1J6 1458 aa2.65□□□□□ -1.99
SCFD1-209ENST00000553280 IGKV1D-17A0A075B6S4 117 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 TRAV8-1A0A0A6YYK1 113 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 LINC00862A6NCI5 91 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 SMIM23A6NLE4 172 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 ACOX3O15254 700 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 DEDDO75618 318 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 STK16O75716 305 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 ISG15P05161 165 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 OR4A8P0C604 315 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 HERVK_113P63121 156 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 SLC35A2P78381 396 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 ZNF141Q15928 474 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 IMPG1Q17R60 797 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 N4BP2L1Q5TBK1 243 aaPredicted RBP2.64□□□□□ -1.99
SCFD1-209ENST00000553280 WDR59Q6PJI9 974 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 NAA40Q86UY6 237 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 ZNF565Q8N9K5 539 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 CCDC112Q8NEF3 446 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 TESCQ96BS2 214 aa2.64□□□□□ -1.99
SCFD1-209ENST00000553280 CARHSP1Q9Y2V2 147 aaKnown RBP2.64□□□□□ -1.99
SCFD1-209ENST00000553280 BRD4O60885 1362 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-209ENST00000553280 C5orf49A4QMS7 147 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 MRASO14807 208 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 TGOLN2O43493 480 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 SYNGR2O43760 224 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 MYL12AP19105 171 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 CRABP1P29762 137 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 AKR1C2P52895 323 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 HLA-DRB3P79483 266 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 DEFB134Q4QY38 66 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 SCXQ7RTU7 201 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 COMMD7Q86VX2 200 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 LYPD6Q86Y78 171 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 ZNF664Q8N3J9 261 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 TMEM161BQ8NDZ6 487 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 OR5P3Q8WZ94 311 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 TM2D3Q9BRN9 247 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 C3orf18Q9UK00 162 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 DKKL1Q9UK85 242 aa2.63□□□□□ -1.99
SCFD1-209ENST00000553280 PLCH2O75038 1416 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 CRB1P82279 1406 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 SEC16AO15027 2179 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 A8MWP6 167 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 PSCAO43653 123 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 IL3P08700 152 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 CD7P09564 240 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 CD36P16671 472 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 RPS12P25398 132 aaKnown RBP2.62□□□□□ -1.99
SCFD1-209ENST00000553280 DDTP30046 118 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 DAPP51397 102 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 SNAP25P60880 206 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 GNA13Q14344 377 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 MRPL51Q4U2R6 128 aaKnown RBP2.62□□□□□ -1.99
SCFD1-209ENST00000553280 ZNF567Q8N184 647 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 OPTNQ96CV9 577 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 IGF2BP2-AS1Q96M15 143 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 TBX5Q99593 518 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 C1QTNF6Q9BXI9 259 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 MRPS26Q9BYN8 205 aaKnown RBP2.62□□□□□ -1.99
SCFD1-209ENST00000553280 HES4Q9HCC6 221 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 EMC3Q9P0I2 261 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 GUCA1BQ9UMX6 200 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 PCYT1BQ9Y5K3 369 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-209ENST00000553280 ALG5Q9Y673 324 aa2.62□□□□□ -1.99
SCFD1-209ENST00000553280 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 M0R036 132 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 CALB1P05937 261 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 SERPINA6P08185 405 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 IGHV3-30-3P0DP02 117 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 ATP6V0CP27449 155 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 OR10J1P30954 320 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 PPP1CCP36873 323 aaKnown RBP2.61□□□□□ -1.99
SCFD1-209ENST00000553280 PYDC2Q56P42 97 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 LPCAT4Q643R3 524 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 RASSF6Q6ZTQ3 369 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 SLC51BQ86UW2 128 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 LINC00304Q8N9R0 145 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 GPR32P1Q8NGA4 272 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 OR8K1Q8NGG5 319 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 JOSD2Q8TAC2 188 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 RAD51AP1Q96B01 352 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 MS4A6EQ96DS6 147 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 TVP23CQ96ET8 276 aa2.61□□□□□ -1.99
SCFD1-209ENST00000553280 UPK3BQ9BT76 320 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms