RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 ZNF79Q15937 498 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 SSX2Q16385 188 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 TUSC1Q2TAM9 212 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 DEFB112Q30KQ8 113 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
ITGA5-213ENST00000553071 LHFPL4Q7Z7J7 247 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 ARRDC1Q8N5I2 433 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 SSMEM1Q8WWF3 244 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 C22orf15Q8WYQ4 148 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 TOMM40LQ969M1 308 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 AGMATQ9BSE5 352 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 WDR12Q9GZL7 423 aaKnown RBP13.94□□□□□ -0.18
ITGA5-213ENST00000553071 SRRQ9GZT4 340 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 ABCB10Q9NRK6 738 aa13.94□□□□□ -0.18
ITGA5-213ENST00000553071 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
ITGA5-213ENST00000553071 A0A1W2PPE3 182 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 VGLL3A8MV65 326 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 LANCL1O43813 399 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 TUSC2O75896 110 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 RAB3DO95716 219 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 CD74P04233 296 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 AKAIN1P0CW23 69 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 NFYAP23511 347 aaPredicted RBP13.93□□□□□ -0.18
ITGA5-213ENST00000553071 GPR12P47775 334 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 RFX2P48378 723 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 DYNLT3P51808 116 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 ZNF816Q0VGE8 651 aaPredicted RBP13.93□□□□□ -0.18
ITGA5-213ENST00000553071 TRIQKQ629K1 86 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 STEAP1BQ6NZ63 245 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 LPCAT3Q6P1A2 487 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 Q6YL49 198 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 TGIF2LXQ8IUE1 241 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 BCL6BQ8N143 479 aaPredicted RBP13.93□□□□□ -0.18
ITGA5-213ENST00000553071 TOMM5Q8N4H5 51 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 TMEM86BQ8N661 226 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 SLC6A7Q99884 636 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 HILPDAQ9Y5L2 63 aa13.93□□□□□ -0.18
ITGA5-213ENST00000553071 FN1P02751 2386 aaKnown RBP13.92□□□□□ -0.18
ITGA5-213ENST00000553071 ANKRD20A5PA0PJZ0 165 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 HSD17B6O14756 317 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 SLC31A2O15432 143 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 CD3DP04234 171 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 CD40LGP29965 261 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 HERV-K104P61576 105 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 ZNF846Q147U1 533 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 MSMO1Q15800 293 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 UTF1Q5T230 341 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 FAM53AQ6NSI3 398 aaPredicted RBP13.92□□□□□ -0.18
ITGA5-213ENST00000553071 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 AKIP1Q9NQ31 210 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 ZNRD1Q9P1U0 126 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
ITGA5-213ENST00000553071 TEP1Q99973 2627 aaKnown RBP13.91□□□□□ -0.18
ITGA5-213ENST00000553071 DISC1C4P0D8 188 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 ST8SIA5O15466 376 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 PPYP01298 95 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 PPP5CP53041 499 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 TAGLNQ01995 201 aaKnown RBP13.91□□□□□ -0.18
ITGA5-213ENST00000553071 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 LURAP1LQ8IV03 231 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 SIGLECL1Q8N7X8 197 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 ZBTB34Q8NCN2 500 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 AJUBAQ96IF1 538 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 ZNF2Q9BSG1 426 aaPredicted RBP13.91□□□□□ -0.18
ITGA5-213ENST00000553071 CCDC32Q9BV29 185 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 PITPNC1Q9UKF7 332 aa13.91□□□□□ -0.18
ITGA5-213ENST00000553071 TCF21O43680 179 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 FAM106CPP0CH98 169 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 S100GP29377 79 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 ECI1P42126 302 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 IER3P46695 156 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 BAMBIQ13145 260 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 ZNF833PQ6ZTB9 187 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 THNSL2Q86YJ6 484 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 MFSD4AQ8N468 514 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 RTN4IP1Q8WWV3 396 aaPredicted RBP13.9□□□□□ -0.18
ITGA5-213ENST00000553071 AKR1E2Q96JD6 320 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 SSX3Q99909 188 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 RNF150Q9ULK6 438 aa13.9□□□□□ -0.18
ITGA5-213ENST00000553071 SAA2-SAA4A0A096LPE2 208 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 CENPXA8MT69 81 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 CLDN34H7C241 214 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 SAA2P0DJI9 122 aaPredicted RBP13.89□□□□□ -0.19
ITGA5-213ENST00000553071 AADACP22760 399 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 MC5RP33032 325 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 HILS1P60008 231 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 LDLRAD2Q5SZI1 272 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 ZNF660Q6AZW8 331 aaPredicted RBP13.89□□□□□ -0.19
ITGA5-213ENST00000553071 MOB3BQ86TA1 216 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 ODF3L1Q8IXM7 274 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
ITGA5-213ENST00000553071 TRIM63Q969Q1 353 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 325 ms