RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 SPNP16150 400 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 MAPK3P27361 379 aaPredicted RBP8.88□□□□□ -0.99
NEK3-204ENST00000552973 INSL3P51460 131 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 CX3CL1P78423 397 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 RUNX1Q01196 453 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 RBM48Q5RL73 367 aaKnown RBP8.88□□□□□ -0.99
NEK3-204ENST00000552973 ZNF554Q86TJ5 538 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 ZNF429Q86V71 674 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 C8orf59Q8N0T1 100 aaPredicted RBP8.88□□□□□ -0.99
NEK3-204ENST00000552973 MS4A10Q96PG2 267 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 TOLLIPQ9H0E2 274 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 CNOT2Q9NZN8 540 aaKnown RBP8.88□□□□□ -0.99
NEK3-204ENST00000552973 PIPOXQ9P0Z9 390 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 STEAP1Q9UHE8 339 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 ERGIC3Q9Y282 383 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 LRRC42Q9Y546 428 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 IGHV4OR15-8A0A075B7B6 117 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 A0A087WW49 117 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 LINC01619G3V211 115 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 H7C2Y5 167 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 RRHO14718 337 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 CD1AP06126 327 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 EGR2P11161 476 aaPredicted RBP8.87□□□□□ -0.99
NEK3-204ENST00000552973 LINC00205P59089 165 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 RPS27AP62979 156 aaKnown RBP8.87□□□□□ -0.99
NEK3-204ENST00000552973 UNC119Q13432 240 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 LY6G6FQ5SQ64 297 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 GLT8D1Q68CQ7 371 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
NEK3-204ENST00000552973 LRRTM1Q86UE6 522 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 SVOPQ8N4V2 548 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 PACRGLQ8N7B6 248 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 ARPC1AQ92747 370 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 HDHD3Q9BSH5 251 aaPredicted RBP8.87□□□□□ -0.99
NEK3-204ENST00000552973 TMEM59Q9BXS4 323 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 SLC23A1Q9UHI7 598 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 RNF150Q9ULK6 438 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 GAB2Q9UQC2 676 aa8.87□□□□□ -0.99
NEK3-204ENST00000552973 FOXA2Q9Y261 457 aaPredicted RBP8.87□□□□□ -0.99
NEK3-204ENST00000552973 A0A0A6YYD4 124 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 H0YJW9 148 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 C3orf84H3BNL1 204 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 RAB29O14966 203 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 UBBP0CG47 229 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 GP9P14770 177 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 CEACAM6P40199 344 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 C19orf54Q5BKX5 351 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 C1orf100Q5SVJ3 147 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 UNQ5815/PRO19632Q6UWF5 114 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 CEACAM19Q7Z692 300 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 DRAXINQ8NBI3 349 aaPredicted RBP8.86□□□□□ -0.99
NEK3-204ENST00000552973 RCHY1Q96PM5 261 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 TPSG1Q9NRR2 321 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 PLCXD1Q9NUJ7 323 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 PLEKHJ1Q9NW61 149 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 OR1A1Q9P1Q5 309 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 METTL1Q9UBP6 276 aaKnown RBP8.86□□□□□ -0.99
NEK3-204ENST00000552973 NUBP2Q9Y5Y2 271 aa8.86□□□□□ -0.99
NEK3-204ENST00000552973 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 TRIM64CA6NLI5 447 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 TMEM14DPA8MWL7 114 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 PTGES3LE9PB15 166 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 SOCS1O15524 211 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 NAPSAO96009 420 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 LGALS1P09382 135 aaKnown RBP8.85□□□□□ -0.99
NEK3-204ENST00000552973 SCTP09683 121 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 FRMD6-AS1P0C7T7 363 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 SRMP19623 302 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 TMEM267Q0VDI3 215 aaPredicted RBP8.85□□□□□ -0.99
NEK3-204ENST00000552973 RCN1Q15293 331 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 P2RY14Q15391 338 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 SRSF7Q16629 238 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEK3-204ENST00000552973 HSD17B12Q53GQ0 312 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 ACTBL2Q562R1 376 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 FAM71F2Q6NXP2 309 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 ZNF880Q6PDB4 577 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 LFNGQ8NES3 379 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 KCNG3Q8TAE7 436 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 THRSPQ92748 146 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 TMEM203Q969S6 136 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 TM2D1Q9BX74 207 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 C11orf54Q9H0W9 315 aaPredicted RBP8.85□□□□□ -0.99
NEK3-204ENST00000552973 GHITMQ9H3K2 345 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 C8orf4Q9NR00 106 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 AK3Q9UIJ7 227 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 WASHC3Q9Y3C0 194 aa8.85□□□□□ -0.99
NEK3-204ENST00000552973 OR5H14A6NHG9 310 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 SLC22A1O15245 554 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 HSPA12AO43301 675 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 PROP1O75360 226 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 CA2P00918 260 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 HSPB1P04792 205 aaKnown RBP8.84□□□□□ -0.99
NEK3-204ENST00000552973 CDK1P06493 297 aa8.84□□□□□ -0.99
NEK3-204ENST00000552973 MC5RP33032 325 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms