RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PECRQ9BY49 303 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 WDR12Q9GZL7 423 aaKnown RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 ATG5Q9H1Y0 275 aa9.34□□□□□ -0.91
CKAP4-202ENST00000552828 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
CKAP4-202ENST00000552828 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 SDCBPO00560 298 aaPredicted RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 RAMP3O60896 148 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 NAPSAO96009 420 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 TGFBR1P36897 503 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 RPS19P39019 145 aaKnown RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 SERPINB10P48595 397 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 SCAND1P57086 179 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 DGCR2P98153 550 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 TMEM30BQ3MIR4 351 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 PLAC9Q5JTB6 97 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 DRAM1Q8N682 238 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 MINDY2Q8NBR6 621 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 OR10R2Q8NGX6 335 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 OR56B4Q8NH76 319 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 TOMM40LQ969M1 308 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 TAF9BQ9HBM6 251 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 AK3Q9UIJ7 227 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
CKAP4-202ENST00000552828 ETV7Q9Y603 341 aa9.33□□□□□ -0.92
CKAP4-202ENST00000552828 TRBV6-6A0A0A6YYG2 114 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 SERPINE3A8MV23 424 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 RAB27BO00194 218 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 SCGNO76038 276 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 HBZP02008 142 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 RAB7AP51149 207 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 VBP1P61758 197 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 NCS1P62166 190 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 SLC35B1P78383 322 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 MRPS15P82914 257 aaKnown RBP9.32□□□□□ -0.92
CKAP4-202ENST00000552828 MADCAM1Q13477 382 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 EBI3Q14213 229 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 SPCS2Q15005 226 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 MOGAT2Q3SYC2 334 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 MOB1BQ7L9L4 216 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 ZNF695Q8IW36 515 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 OR8H3Q8N146 312 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 PRR18Q8N4B5 295 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 OR1L1Q8NH94 360 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 UBALD1Q8TB05 177 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 SETD6Q8TBK2 473 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 LGALS14Q8TCE9 139 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 CMSS1Q9BQ75 279 aaKnown RBP9.32□□□□□ -0.92
CKAP4-202ENST00000552828 C12orf4Q9NQ89 552 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 GFOD1Q9NXC2 390 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 ABRACLQ9P1F3 81 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 GNG12Q9UBI6 72 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 MGAT4AQ9UM21 535 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 A3GALT2U3KPV4 340 aa9.32□□□□□ -0.92
CKAP4-202ENST00000552828 A0A075B6Q4 140 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 NUDT19A8MXV4 375 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 IGHV3-7P01780 117 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 CD3GP09693 182 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 GNB3P16520 340 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 TMEM11P17152 192 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 DIAPH2-AS1Q14236 149 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 Q3ZCU0 254 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 ZNF880Q6PDB4 577 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 TEX38Q6PEX7 206 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 SLC35E3Q7Z769 313 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 STPG2Q8N412 459 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 KLHL30-AS1Q8NEE0 82 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 DYNC2LI1Q8TCX1 351 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 SLC25A46Q96AG3 418 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 GALMQ96C23 342 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 RAX2Q96IS3 184 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 AKIP1Q9NQ31 210 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 OR2S2Q9NQN1 319 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 RHBDL2Q9NX52 303 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 U3KQK5 164 aa9.31□□□□□ -0.92
CKAP4-202ENST00000552828 RYR2Q92736 4967 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 IGHV3-43A0A0B4J1X8 118 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 LINC01548A6NM66 108 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 CCL24O00175 119 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 MFNGO00587 321 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 IGHV3-43DP0DP04 118 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HIST1H1DP16402 221 aaKnown RBP9.3□□□□□ -0.92
CKAP4-202ENST00000552828 TALDO1P37837 337 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 GNG10P50151 68 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HTD2P86397 168 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HES1Q14469 280 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HNF4GQ14541 408 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 KIR2DS1Q14954 304 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HMGN3Q15651 99 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 RGS21Q2M5E4 152 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms