RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 RNF7Q9UBF6 113 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 DPRXA6NFQ7 191 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 CST7O76096 145 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 THBDP07204 575 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 TNFSF4P23510 183 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 CD80P33681 288 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 ID4P47928 161 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 RAB5CP51148 216 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 DEFA5Q01523 94 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 CATR1Q13166 79 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 ATRAIDQ6UW56 229 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 LRRC46Q96FV0 321 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 MMP24Q9Y5R2 645 aa11.68□□□□□ -0.54
RAB3IP-216ENST00000552199 BSNQ9UPA5 3926 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 DMXL2Q8TDJ6 3036 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 DEFB108AA8MXU0 73 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 TXNL1O43396 289 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 SYNGR2O43760 224 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 GFRA3O60609 400 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 RAMP3O60896 148 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 ARHGDIBP52566 201 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 SSX8Q7RTT4 187 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
RAB3IP-216ENST00000552199 ATG12O94817 140 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 CLDN1O95832 211 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 TMPRSS3P57727 454 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 BRWD1-AS2P59051 145 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 RBPJQ06330 500 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 C10orf91Q5T1B1 145 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 BTNL3Q6UXE8 466 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 SPAG16Q8N0X2 631 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 Q8TCH9 128 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 TCTEX1D2Q8WW35 142 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 TMEM231Q9H6L2 316 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 WSB1Q9Y6I7 421 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ATMQ13315 3056 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 C17orf98A8MV24 154 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 P0C879 139 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ADCYAP1P18509 176 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ATP6V0CP27449 155 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 CAMLGP49069 296 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 SULT1A1P50225 295 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 LTC4SQ16873 150 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 MORN2Q502X0 79 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 OR2B11Q5JQS5 317 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 STX12Q86Y82 276 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 ZNF561Q8N587 486 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 C14orf79Q96F83 325 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 JPT1Q9UK76 154 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 DSCAMO60469 2012 aa11.66□□□□□ -0.54
RAB3IP-216ENST00000552199 FAM90A26D6RGX4 464 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 H3BP45 60 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 F2RL2O00254 374 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 TOR1AO14656 332 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 AGPAT2O15120 278 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 YPEL1O60688 119 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 CYB5R3P00387 301 aaPredicted RBP11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 CGB3P0DN86 165 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 CGB7P0DN87 165 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 IAPPP10997 89 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 EDDM3BP56851 147 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 BSPH1Q075Z2 132 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 ADIPOQQ15848 244 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 STUMQ69YW2 141 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 TMEM182Q6ZP80 229 aaPredicted RBP11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 SDSLQ96GA7 329 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 HSD17B10Q99714 261 aaKnown RBP11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 ATP5SQ99766 215 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 PSENENQ9NZ42 101 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 OR6C3Q9NZP0 311 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 PIEZO2Q9H5I5 2752 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 MAP1BP46821 2468 aaKnown RBP11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
RAB3IP-216ENST00000552199 LINC00473A8K010 186 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms