RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TSEN15Q8WW01 171 aaKnown RBP11.5□□□□□ -0.57
CACNB3-220ENST00000551716 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
CACNB3-220ENST00000551716 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
CACNB3-220ENST00000551716 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
CACNB3-220ENST00000551716 TECRQ9NZ01 308 aaKnown RBP11.5□□□□□ -0.57
CACNB3-220ENST00000551716 WASHC3Q9Y3C0 194 aa11.5□□□□□ -0.57
CACNB3-220ENST00000551716 H7C2Y5 167 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 RAB29O14966 203 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 CA2P00918 260 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-220ENST00000551716 SERPINA2P20848 420 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
CACNB3-220ENST00000551716 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
CACNB3-220ENST00000551716 DYRK1AQ13627 763 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 DEFB114Q30KQ6 69 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 C6orf141Q5SZD1 244 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 LYG2Q86SG7 212 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 BVESQ8NE79 360 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 OR5AK2Q8NH90 309 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 GALMQ96C23 342 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
CACNB3-220ENST00000551716 ALG8Q9BVK2 526 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
CACNB3-220ENST00000551716 FKBP6O75344 327 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 SPDEFO95238 335 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 GLAP06280 429 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 CD2P06729 351 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 ZNF93P35789 620 aaPredicted RBP11.48□□□□□ -0.57
CACNB3-220ENST00000551716 KIR2DS2P43631 304 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 LGALS7P47929 136 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 PSG5Q15238 335 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 RAB12Q6IQ22 244 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 Q6ZWC4 215 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 OR5AN1Q8NGI8 311 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 GRPEL2Q8TAA5 225 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 C4orf36Q96KX1 117 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 TINAGL1Q9GZM7 467 aaPredicted RBP11.48□□□□□ -0.57
CACNB3-220ENST00000551716 WFDC10AQ9H1F0 79 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 TMEM138Q9NPI0 162 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 ZC4H2Q9NQZ6 224 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
CACNB3-220ENST00000551716 STEAP1Q9UHE8 339 aa11.48□□□□□ -0.57
CACNB3-220ENST00000551716 H0YJW9 148 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 J3QRE1 110 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 SPRY2O43597 315 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 MAS1P04201 325 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 GNMTQ14749 295 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 SLC22A6Q4U2R8 563 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 PHLDA1Q8WV24 401 aaPredicted RBP11.47□□□□□ -0.57
CACNB3-220ENST00000551716 NSL1Q96IY1 281 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 ADAM30Q9UKF2 790 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 ARL2BPQ9Y2Y0 163 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
CACNB3-220ENST00000551716 G3V2T6 193 aa11.46□□□□□ -0.57
CACNB3-220ENST00000551716 GPX5O75715 221 aa11.46□□□□□ -0.57
CACNB3-220ENST00000551716 SC5DO75845 299 aa11.46□□□□□ -0.57
CACNB3-220ENST00000551716 PPP3R1P63098 170 aa11.46□□□□□ -0.57
CACNB3-220ENST00000551716 KDM4DQ6B0I6 523 aa11.46□□□□□ -0.57
CACNB3-220ENST00000551716 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.57
CACNB3-220ENST00000551716 UBE2CO00762 179 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 CPEP16870 476 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 APOC4P55056 127 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 TCTAP57738 103 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
CACNB3-220ENST00000551716 FAM209BQ5JX69 171 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 SPATA24Q86W54 205 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 SYS1Q8N2H4 156 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 THRSPQ92748 146 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 IFI27L2Q9H2X8 130 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 TAS2R4Q9NYW5 299 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 ABRACLQ9P1F3 81 aa11.45□□□□□ -0.58
CACNB3-220ENST00000551716 FAM90A7PA6NKC0 464 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 SNTNA6NMZ2 147 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 FAM90A23PA8MXZ1 464 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 FOLR2P14207 255 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 FUT3P21217 361 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 MAP2K4P45985 399 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 RPS16P62249 146 aaKnown RBP11.44□□□□□ -0.58
CACNB3-220ENST00000551716 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
CACNB3-220ENST00000551716 ZDHHC13Q8IUH4 622 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 OR52B4Q8NGK2 314 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 PDCD1LG2Q9BQ51 273 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 SULT4A1Q9BR01 284 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 COA4Q9NYJ1 87 aa11.44□□□□□ -0.58
CACNB3-220ENST00000551716 MSGN1A6NI15 193 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 BDKRB2P30411 391 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 CAPGP40121 348 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 GBX2P52951 348 aaPredicted RBP11.43□□□□□ -0.58
CACNB3-220ENST00000551716 RPL39P5Q59GN2 51 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 MEDAGQ5VYS4 303 aa11.43□□□□□ -0.58
CACNB3-220ENST00000551716 GLDNQ6ZMI3 551 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms