RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TSPAN4O14817 238 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 DHRS3O75911 302 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF682O95780 498 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR2H2O95918 312 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA10P01566 189 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA21P01568 189 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA14P01570 189 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA17P01571 189 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TRBV12-3P01733 135 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 C1QBP02746 253 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TRGV3P03979 118 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CSTBP04080 98 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MT1HL1P0DM35 61 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 PRB4P10163 310 aaPredicted RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 SLC2A2P11168 524 aaPredicted RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MIFP14174 115 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MYOD1P15172 320 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CCL1P22362 96 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GALP22466 123 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CBLN1P23435 193 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GABRR1P24046 479 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CD40LGP29965 261 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RPS27P42677 84 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OMPP47874 163 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 KCNJ3P48549 501 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ABCE1P61221 599 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 AESQ08117 197 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RIPPLY1Q0D2K3 151 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TRAM2Q15035 370 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GUCA2BQ16661 112 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CYP51A1Q16850 503 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RPEL1Q2QD12 228 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 KLK9Q2XQG4 91 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 C12orf74Q32Q52 190 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM41BQ5BJD5 291 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 PAGE3Q5JUK9 113 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 LY6G6FQ5SQ64 297 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CLVS2Q5SYC1 327 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF684Q5T5D7 378 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 LELP1Q5T871 98 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 PLCXD3Q63HM9 321 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 DEGS2Q6QHC5 323 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 Q6ZRN7 208 aaPredicted RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MOB3BQ86TA1 216 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GPHB5Q86YW7 130 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 FUNDC1Q8IVP5 155 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MICU2Q8IYU8 434 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 FAM86B1Q8N7N1 296 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CCDC63Q8NA47 563 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 DNAAF1Q8NEP3 725 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR52B4Q8NGK2 314 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR9I1Q8NGQ6 314 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR10X1Q8NGY0 326 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR11H2Q8NH07 326 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 SVIPQ8NHG7 77 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OTOSQ8NHW6 89 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 TRMT10AQ8TBZ6 339 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ZNRF4Q8WWF5 429 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GHSRQ92847 366 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MARC2Q969Z3 335 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RSRC1Q96IZ7 334 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RDH12Q96NR8 316 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ERMAPQ96PL5 475 aaPredicted RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RNF5Q99942 180 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CHST6Q9GZX3 395 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 C5orf66Q9H5L9 145 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ROPN1Q9HAT0 212 aaPredicted RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 ADGRL4Q9HBW9 690 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 HMG20AQ9NP66 347 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 SLC2A9Q9NRM0 540 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GPR173Q9NS66 373 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 FAM206AQ9NX38 181 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 IDI2-AS1Q9NZ38 188 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 PTTG2Q9NZH5 202 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR14J1Q9UGF5 321 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MLXQ9UH92 298 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 NUFIP1Q9UHK0 495 aaKnown RBP1.58□□□□□ -2.16
PTCH1-223ENST00000551623 KLK9Q9UKQ9 250 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 SH3GLB1Q9Y371 365 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 OR2W1Q9Y3N9 320 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 GMPPBQ9Y5P6 360 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 CDH10Q9Y6N8 788 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 V9GYS6 101 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PTCH1-223ENST00000551623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 A0A0B4J203 849 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 A0A1B0GTI1 187 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 C13orf42A0A1B0GVH6 325 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 A0A1W2PPE3 182 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 A0A1W2PS18 150 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FAM223BA6NKX1 122 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 TRPC5OSA6NMA1 111 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 C15orf61A6NNL5 157 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FAM220BPB1ANY3 271 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SLC33A1O00400 549 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF593O00488 134 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SH2D1BO14796 132 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ZSCAN12O43309 604 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ORC5O43913 435 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms