RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 YLPM1P49750 1951 aaKnown RBP16.28■□□□□ 0.2
SSH1-209ENST00000551165 NKX6-3A6NJ46 265 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 RAMP3O60896 148 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 RP2O75695 350 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 OR2F2O95006 317 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 S100GP29377 79 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 BRWD1-AS2P59051 145 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 SRPXP78539 464 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 OR2F1Q13607 317 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 ZNF345Q14585 488 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 NMSQ5H8A3 153 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 A0A0D9SG52 128 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 KBTBD11-OT1A0A1B0GTJ5 212 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 K7EPK0 472 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 NXPH3O95157 252 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 SPDEFO95238 335 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 SERPINE2P07093 398 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 ZNF273Q14593 569 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 FAM71E2Q8N5Q1 922 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 OR4D5Q8NGN0 318 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 CLN8Q9UBY8 286 aa16.27■□□□□ 0.2
SSH1-209ENST00000551165 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 DEDDO75618 318 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 Q3ZCU0 254 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 C1orf229Q6ZS94 237 aaPredicted RBP16.27■□□□□ 0.19
SSH1-209ENST00000551165 OR8H3Q8N146 312 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 NCOR1P1Q9H4R4 102 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 JPT1Q9UK76 154 aa16.27■□□□□ 0.19
SSH1-209ENST00000551165 EPG5Q9HCE0 2579 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 C4BPBP20851 252 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 HFEQ30201 348 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 CXorf66Q5JRM2 361 aaPredicted RBP16.26■□□□□ 0.19
SSH1-209ENST00000551165 ALKAL2Q6UX46 152 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 LINC00473A8K010 186 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 Q6ZRM9 215 aa16.26■□□□□ 0.19
SSH1-209ENST00000551165 SPTAN1Q13813 2472 aaKnown RBP16.25■□□□□ 0.19
SSH1-209ENST00000551165 YPEL1O60688 119 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 IGKV1-5P01602 117 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 WNT2P09544 360 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 EPHA1P21709 976 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 VDAC1P21796 283 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 NFYBP25208 207 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 PRAMEF5Q5TYX0 476 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 C11orf71Q6IPW1 123 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 CLEC9AQ6UXN8 241 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 GPR146Q96CH1 333 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 RBMXL1Q96E39 390 aaKnown RBP16.25■□□□□ 0.19
SSH1-209ENST00000551165 YPEL2Q96QA6 119 aa16.25■□□□□ 0.19
SSH1-209ENST00000551165 C17orf98A8MV24 154 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 DVL1O14640 695 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 BCL2L11O43521 198 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 SNAPC5O75971 98 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 CCL3L1P16619 93 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 AGAP20933 346 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 RPL39P5Q59GN2 51 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 MAGT1Q9H0U3 335 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 PLEKHF2Q9H8W4 249 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 ZNRD1Q9P1U0 126 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 RLN2P04090 185 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 RNF224P0DH78 156 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 HKR1P10072 659 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 PPOXP50336 477 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 RPL31P62899 125 aaKnown RBP16.24■□□□□ 0.19
SSH1-209ENST00000551165 CT45A1Q5HYN5 189 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 CT45A3Q8NHU0 189 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 IFI27L2Q9H2X8 130 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 CBLN4Q9NTU7 201 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 LIN7CQ9NUP9 197 aaKnown RBP16.24■□□□□ 0.19
SSH1-209ENST00000551165 GFOD1Q9NXC2 390 aa16.24■□□□□ 0.19
SSH1-209ENST00000551165 RCL1Q9Y2P8 373 aaKnown RBP16.24■□□□□ 0.19
SSH1-209ENST00000551165 KANTRA0A1W2PQU2 76 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 IFNA7P01567 189 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 DANCRP0C864 163 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
SSH1-209ENST00000551165 DMBX1Q8NFW5 382 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 H1FXQ92522 213 aaKnown RBP16.23■□□□□ 0.19
SSH1-209ENST00000551165 CORO2AQ92828 525 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 IL22RA2Q969J5 263 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 UBQLN2Q9UHD9 624 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 PET100P0DJ07 73 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 LPAR6P43657 344 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 POLR2GP62487 172 aaKnown RBP eCLIP16.23■□□□□ 0.19
SSH1-209ENST00000551165 AVPI1Q5T686 147 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 TMEM200BQ69YZ2 307 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 SLC51BQ86UW2 128 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 TCTEX1D2Q8WW35 142 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 BSCL2Q96G97 398 aaPredicted RBP16.23■□□□□ 0.19
SSH1-209ENST00000551165 AQP10Q96PS8 301 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 ZNF471Q9BX82 626 aaPredicted RBP16.23■□□□□ 0.19
SSH1-209ENST00000551165 LAMP3Q9UQV4 416 aa16.23■□□□□ 0.19
SSH1-209ENST00000551165 CLDN1O95832 211 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 GPR12P47775 334 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 ZBTB34Q8NCN2 500 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 EDARADDQ8WWZ3 215 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 USP9XQ93008 2570 aaPredicted RBP16.22■□□□□ 0.19
SSH1-209ENST00000551165 RPS10-NUDT3A0A1W2PQS6 291 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 hADV38S2A0JD32 116 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 CLEC18AA5D8T8 446 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 NDUFB3O43676 98 aa16.22■□□□□ 0.19
SSH1-209ENST00000551165 GNG10P50151 68 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms