RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CX3CL1P78423 397 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 ECSCRQ19T08 205 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 ZFP41Q8N8Y5 198 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 SETD9Q8NE22 299 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
PTCH1-221ENST00000550914 NEDD4LQ96PU5 975 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 CITED4Q96RK1 184 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 RNF5Q99942 180 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 ALX4Q9H161 411 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-221ENST00000550914 IFI27L2Q9H2X8 130 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 STEAP1Q9UHE8 339 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 FBXO7Q9Y3I1 522 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 NUBP2Q9Y5Y2 271 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
PTCH1-221ENST00000550914 EFCAB10A6NFE3 127 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 ITGB1BP1O14713 200 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 HSPB1P04792 205 aaKnown RBP9.91□□□□□ -0.82
PTCH1-221ENST00000550914 PITPNAQ00169 270 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 ST3GAL4Q11206 333 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 LRRC36Q1X8D7 754 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 AKIRIN2Q53H80 203 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 TTC23Q5W5X9 447 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 FAM131AQ6UXB0 335 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 MOB1BQ7L9L4 216 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 OVCH2Q7RTZ1 564 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 ARPC1AQ92747 370 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 FAM46BQ96A09 425 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 SULT4A1Q9BR01 284 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 SLA2Q9H6Q3 261 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 SLC23A1Q9UHI7 598 aa9.91□□□□□ -0.82
PTCH1-221ENST00000550914 IGHV4OR15-8A0A075B7B6 117 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 A0A087WW49 117 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 A8MZ25 164 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 BAG2O95816 211 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 NAPSAO96009 420 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CT45A6P0DMU7 189 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CT45A5P0DMU8 189 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CT45A7P0DMV0 189 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CELP19835 753 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CD40LGP29965 261 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 PLGLAQ15195 96 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 ACTBL2Q562R1 376 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF880Q6PDB4 577 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 ZNF562Q6V9R5 426 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 C5orf24Q7Z6I8 188 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 SVOPQ8N4V2 548 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 OR5AN1Q8NGI8 311 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 GGHQ92820 318 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 RIMS4Q9H426 269 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-221ENST00000550914 C8orf4Q9NR00 106 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 CNOT2Q9NZN8 540 aaKnown RBP9.9□□□□□ -0.82
PTCH1-221ENST00000550914 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
PTCH1-221ENST00000550914 PNMA8CA0A1B0GUJ8 204 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 TRIM64CA6NLI5 447 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 H0YJW9 148 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 ST8SIA5O15466 376 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 HSPA12AO43301 675 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 TFAP2AP05549 437 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 GSTP1P09211 210 aaKnown RBP9.89□□□□□ -0.83
PTCH1-221ENST00000550914 WNT4P56705 351 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 RPS27AP62979 156 aaKnown RBP9.89□□□□□ -0.83
PTCH1-221ENST00000550914 RPL39P5Q59GN2 51 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 C1orf100Q5SVJ3 147 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 PPP1R27Q86WC6 154 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 KCNG3Q8TAE7 436 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 CYYR1Q96J86 154 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 RHOVQ96L33 236 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 AGMATQ9BSE5 352 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 FAAP24Q9BTP7 215 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 ELOVL1Q9BW60 279 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 TM2D1Q9BX74 207 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 TMEM59Q9BXS4 323 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 STUB1Q9UNE7 303 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
PTCH1-221ENST00000550914 TRBV6-6A0A0A6YYG2 114 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 LCE6AA0A183 80 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 H7C2Y5 167 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 FCN1O00602 326 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 MYL12BO14950 172 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 SPDEFO95238 335 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 UNQ5815/PRO19632Q6UWF5 114 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 C6orf201Q7Z4U5 140 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 PACRGLQ8N7B6 248 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 ABHD5Q8WTS1 349 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 CYGBQ8WWM9 190 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 PHYHIPQ92561 330 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 MGAT4AQ9UM21 535 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 A3GALT2U3KPV4 340 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 DNAH1Q9P2D7 4330 aa9.88□□□□□ -0.83
PTCH1-221ENST00000550914 H3BUA1 57 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 SLC22A1O15245 554 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms