RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 NUP214P35658 2090 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IGHV3-49A0A0A0MS15 119 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 GOLGA8MH3BSY2 632 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 UPK1BO75841 260 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 EPPINO95925 133 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CYB5R3P00387 301 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 SOD1P00441 154 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IGLV2-8P01709 118 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CXCR1P25024 350 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IVDP26440 423 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 EVI2BP34910 448 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 HAAOP46952 286 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 VBP1P61758 197 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 PAFAH1B2P68402 229 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 PLGLB1Q02325 96 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 C6orf99Q4VX62 202 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 BRMS1LQ5PSV4 323 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 KDM4DQ6B0I6 523 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IGFL1Q6UW32 110 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 ASCL4Q6XD76 172 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 STX12Q86Y82 276 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CRLF3Q8IUI8 442 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 SLC30A8Q8IWU4 369 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 ST13P4Q8IZP2 240 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 RNF182Q8N6D2 247 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 ZFP62Q8NB50 900 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 OR4E2Q8NGC2 313 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IFT81Q8WYA0 676 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 TFGQ92734 400 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CDS1Q92903 461 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CEP19Q96LK0 163 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 SELENOSQ9BQE4 189 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF717Q9BY31 904 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 CHRNA10Q9GZZ6 450 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 OR51B5Q9H339 312 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 FBXO6Q9NRD1 293 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-205ENST00000550592 AGPAT3Q9NRZ7 376 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 IFNKQ9P0W0 207 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 SIGLEC7Q9Y286 467 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 KPTNQ9Y664 436 aa2.72□□□□□ -1.97
LIMA1-205ENST00000550592 M0QYV0 167 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 M0R1X1 148 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 GATBO75879 557 aaKnown RBP2.71□□□□□ -1.98
LIMA1-205ENST00000550592 OR5F1O95221 314 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 ETHE1O95571 254 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 TTC4O95801 387 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 S100A9P06702 114 aaKnown RBP2.71□□□□□ -1.98
LIMA1-205ENST00000550592 ALDH3A1P30838 453 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 PLTPP55058 493 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 XRCC4Q13426 336 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 GNA13Q14344 377 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 Q3ZCU0 254 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 KPRPQ5T749 579 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-205ENST00000550592 AADACL4Q5VUY2 407 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 DEFB106AQ8N104 65 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 OR6K6Q8NGW6 343 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 CDC26Q8NHZ8 85 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 CAPZA3Q96KX2 299 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-205ENST00000550592 SCRT1Q9BWW7 348 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 SUCNR1Q9BXA5 334 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 YIPF3Q9GZM5 350 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 NDEL1Q9GZM8 345 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 TRIM45Q9H8W5 580 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-205ENST00000550592 SLC23A2Q9UGH3 650 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 TIMM22Q9Y584 194 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 SNX10Q9Y5X0 201 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 NINQ8N4C6 2090 aa2.71□□□□□ -1.98
LIMA1-205ENST00000550592 KIAA1549Q9HCM3 1950 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 MUC4Q99102 2169 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 A8MUU9 505 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 C2orf74A8MZ97 194 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 CRTAPO75718 401 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-205ENST00000550592 SOD3P08294 240 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 STAG3L2P0CL84 134 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 CBX5P45973 191 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 GABRA4P48169 554 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 MRPS25P82663 173 aaKnown RBP2.7□□□□□ -1.98
LIMA1-205ENST00000550592 SPCS2Q15005 226 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 MOGQ16653 247 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 DEFB110Q30KQ9 67 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 KRTAP13-2Q52LG2 175 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 HSP90AA4PQ58FG1 418 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 RPS19BP1Q86WX3 136 aaKnown RBP2.7□□□□□ -1.98
LIMA1-205ENST00000550592 ZNF101Q8IZC7 436 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 ST20-AS1Q8NBB2 130 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 OR1S1Q8NH92 325 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 LCN9Q8WX39 176 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 TMEM234Q8WY98 164 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 NAPGQ99747 312 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-205ENST00000550592 ARV1Q9H2C2 271 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 GAL3ST2Q9H3Q3 398 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 FAM60AQ9NP50 221 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 IMP3Q9NV31 184 aaKnown RBP2.7□□□□□ -1.98
LIMA1-205ENST00000550592 C14orf105Q9NVL8 296 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 EURLQ9NYK6 297 aa2.7□□□□□ -1.98
LIMA1-205ENST00000550592 MARCOQ9UEW3 520 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms