RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 RBM14Q96PK6 669 aaKnown RBP4.44□□□□□ -1.7
UBE2N-202ENST00000548946 SIGLEC12Q96PQ1 595 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 TP53RKQ96S44 253 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 CDCA3Q99618 268 aaPredicted RBP4.44□□□□□ -1.7
UBE2N-202ENST00000548946 NIPSNAP3BQ9BS92 247 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 RPP25Q9BUL9 199 aaKnown RBP4.44□□□□□ -1.7
UBE2N-202ENST00000548946 METTL9Q9H1A3 318 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 SRD5A3Q9H8P0 318 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 SDF2L1Q9HCN8 221 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 SLC2A9Q9NRM0 540 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 LYRM2Q9NU23 88 aaPredicted RBP4.44□□□□□ -1.7
UBE2N-202ENST00000548946 ZNF701Q9NV72 531 aaPredicted RBP4.44□□□□□ -1.7
UBE2N-202ENST00000548946 PLEKHJ1Q9NW61 149 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 PPP1R14DQ9NXH3 145 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 ZNF581Q9P0T4 197 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 VAX2Q9UIW0 290 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 DKKL1Q9UK85 242 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 POLR1DQ9Y2S0 133 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 ATG2BQ96BY7 2078 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 C2orf16Q68DN1 1984 aa4.44□□□□□ -1.7
UBE2N-202ENST00000548946 HTTP42858 3142 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 A0A087WZY1 265 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SPTY2D1-AS1A0A0U1RR47 76 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 C3orf85A0A1B0GTC6 90 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 DUXBA0A1W2PPF3 345 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SHISA7A6NL88 538 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 ZNF850A8MQ14 1090 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 PHF1O43189 567 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 GCGP01275 180 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OPN1MWP04001 364 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 QDPRP09417 244 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OPN1MW2P0DN77 364 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OPN1MW3P0DN78 364 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 COX5BP10606 129 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 FUT3P21217 361 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 UCP1P25874 307 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OTX1P32242 354 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 APLNRP35414 380 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 PTGDSP41222 190 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 FASLGP48023 281 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 CCR5P51681 352 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 GFERP55789 205 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 FBXW4P57775 412 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 HILS1P60008 231 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 RPL23AP62750 156 aaKnown RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 H3F3AP84243 136 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TLE4Q04727 773 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TNFRSF9Q07011 255 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 BAXQ07812 192 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 RNPS1Q15287 305 aaKnown RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OR8B8Q15620 311 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 NMSQ5H8A3 153 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 DMRTC1Q5HYR2 192 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 CXorf66Q5JRM2 361 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 C10orf128Q5T292 105 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 AKR1C8PQ5T2L2 129 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TCEAL6Q6IPX3 200 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 C16orf47Q6ZP98 133 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 Q6ZS49 121 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 C9orf139Q6ZV77 190 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 CPEB2Q7Z5Q1 589 aaKnown RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 C17orf82Q86X59 251 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TGIF2LYQ8IUE0 185 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 ZNF100Q8IYN0 542 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 CMTM1Q8IZ96 169 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SLC35G3Q8N808 338 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 NFAM1Q8NET5 270 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OR10A7Q8NGE5 316 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OR5L1Q8NGL2 311 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OR1P1Q8NH06 330 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 DYRK2Q92630 601 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TMEM54Q969K7 222 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 PIGTQ969N2 578 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 OXGR1Q96P68 337 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SPIN2AQ99865 258 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SPIN2BQ9BPZ2 258 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 AGMATQ9BSE5 352 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 LRRC61Q9BV99 259 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 DDA1Q9BW61 102 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 TMEM222Q9H0R3 208 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 CRLF2Q9HC73 371 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 ZNF160Q9HCG1 818 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 GPR173Q9NS66 373 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 IL36GQ9NZH8 169 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SLC7A11Q9UPY5 501 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 COL5A1P20908 1838 aaPredicted RBP4.43□□□□□ -1.7
UBE2N-202ENST00000548946 SHANK1Q9Y566 2161 aa4.43□□□□□ -1.7
UBE2N-202ENST00000548946 DOCK8Q8NF50 2099 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 F5P12259 2224 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 IGKV1-27A0A075B6S5 117 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 IGHV4OR15-8A0A075B7B6 117 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 IGKV1-12A0A0C4DH73 117 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 hDV102S1A0JD36 115 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 VSTM2BA6NLU5 285 aa4.42□□□□□ -1.7
UBE2N-202ENST00000548946 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms