RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 A0A1W2PR64 198 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 A0A1W2PRV1 198 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 DEDDO75618 318 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 LY86O95711 162 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 CLDN1O95832 211 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 DAOP14920 347 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 ZNF16P17020 682 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-215ENST00000547672 SSTR2P30874 369 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 TMEM33P57088 247 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 UBA52P62987 128 aaKnown RBP11.15□□□□□ -0.62
PTCH1-215ENST00000547672 TAGLNQ01995 201 aaKnown RBP11.15□□□□□ -0.62
PTCH1-215ENST00000547672 RAB32Q13637 225 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
PTCH1-215ENST00000547672 OR51H1Q8NH63 302 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 AQP10Q96PS8 301 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 ARPC5LQ9BPX5 153 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 PRR13Q9NZ81 148 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 PSG11Q9UQ72 335 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 POMT1Q9Y6A1 747 aa11.15□□□□□ -0.62
PTCH1-215ENST00000547672 ICE1Q9Y2F5 2266 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 K7EPK0 472 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 WRBO00258 174 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 RAB29O14966 203 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 TNFSF12O43508 249 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 BCL2L11O43521 198 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 TFF1P04155 84 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 NKX2-1P43699 371 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-215ENST00000547672 P2RY1P47900 373 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 LOXL3P58215 753 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 HEPN1Q6WQI6 88 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 C8orf31Q8N9H6 132 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 PHYHIPLQ96FC7 376 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 S1PR3Q99500 378 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 SLC25A31Q9H0C2 315 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 RALYQ9UKM9 306 aaKnown RBP11.14□□□□□ -0.63
PTCH1-215ENST00000547672 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
PTCH1-215ENST00000547672 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-215ENST00000547672 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 RBFOX2O43251 390 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTCH1-215ENST00000547672 GPR137BO60478 399 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 MED6O75586 246 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 IGLV2-14P01704 120 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 AKR1C2P52895 323 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 VAMP2P63027 116 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 TMEM155Q4W5P6 130 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 NMSQ5H8A3 153 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 KIAA2026Q5HYC2 2103 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 OR4D5Q8NGN0 318 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 UBALD1Q8TB05 177 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 TCTEX1D2Q8WW35 142 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 ABHD14AQ9BUJ0 271 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 HEXA-AS1Q9H8Q6 139 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 COA4Q9NYJ1 87 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
PTCH1-215ENST00000547672 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
PTCH1-215ENST00000547672 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 DIDO1Q9BTC0 2240 aaKnown RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 CACNA1DQ01668 2161 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 A6NNC1 897 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 MPTX1A8MV57 137 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 F5H0A9 414 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 DVL1O14640 695 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 MBPP02686 304 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 RBP4P02753 201 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 DANCRP0C864 163 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 IGFBP2P18065 325 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 LPAR6P43657 344 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 THBS3P49746 956 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 SPAG16Q8N0X2 631 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 OR8B3Q8NGG8 313 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 LHFPL5Q8TAF8 219 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 LRRC20Q8TCA0 184 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 OR8B2Q96RD0 313 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 RAB40CQ96S21 281 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 CHODLQ9H9P2 273 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
PTCH1-215ENST00000547672 LSM5Q9Y4Y9 91 aaKnown RBP11.12□□□□□ -0.63
PTCH1-215ENST00000547672 IGHV3-43A0A0B4J1X8 118 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 SCAF4O95104 1147 aaKnown RBP11.11□□□□□ -0.63
PTCH1-215ENST00000547672 HPRT1P00492 218 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 IGHV3-43DP0DP04 118 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 RRASP10301 218 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 TPT1P13693 172 aaKnown RBP11.11□□□□□ -0.63
PTCH1-215ENST00000547672 COL8A2P25067 703 aa11.11□□□□□ -0.63
PTCH1-215ENST00000547672 NFYBP25208 207 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms