RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 MBD3L5A6NJ08 208 aaPredicted RBP13.01□□□□□ -0.33
BRF1-212ENST00000547562 FAM90A26D6RGX4 464 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 RAMP3O60896 148 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 FOLR2P14207 255 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 COL10A1Q03692 680 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 SOHLH1Q5JUK2 328 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 MBD3L2Q8NHZ7 208 aaPredicted RBP13.01□□□□□ -0.33
BRF1-212ENST00000547562 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 KLF2Q9Y5W3 355 aaPredicted RBP13.01□□□□□ -0.33
BRF1-212ENST00000547562 RHEBQ15382 184 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 BEND4Q6ZU67 534 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 HAPLN4Q86UW8 402 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 ZNF525Q8N782 197 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 FAM169BQ8N8A8 192 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 TUBA4BQ9H853 241 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
BRF1-212ENST00000547562 GLIPR1P48060 266 aa13□□□□□ -0.33
BRF1-212ENST00000547562 RPL30P62888 115 aaKnown RBP13□□□□□ -0.33
BRF1-212ENST00000547562 HBG1P69891 147 aa13□□□□□ -0.33
BRF1-212ENST00000547562 HBG2P69892 147 aa13□□□□□ -0.33
BRF1-212ENST00000547562 HAGHQ16775 308 aa13□□□□□ -0.33
BRF1-212ENST00000547562 ZNF808Q8N4W9 903 aaPredicted RBP13□□□□□ -0.33
BRF1-212ENST00000547562 SCGB1C1Q8TD33 95 aa13□□□□□ -0.33
BRF1-212ENST00000547562 HIST1H2BAQ96A08 127 aa13□□□□□ -0.33
BRF1-212ENST00000547562 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
BRF1-212ENST00000547562 RSG1Q9BU20 258 aa13□□□□□ -0.33
BRF1-212ENST00000547562 HBE1P02100 147 aa13□□□□□ -0.33
BRF1-212ENST00000547562 SSTR5P35346 364 aa13□□□□□ -0.33
BRF1-212ENST00000547562 RAB2AP61019 212 aa13□□□□□ -0.33
BRF1-212ENST00000547562 UBE2KP61086 200 aa13□□□□□ -0.33
BRF1-212ENST00000547562 MZT1Q08AG7 82 aa13□□□□□ -0.33
BRF1-212ENST00000547562 CATR1Q13166 79 aa13□□□□□ -0.33
BRF1-212ENST00000547562 TPRX1Q8N7U7 411 aa13□□□□□ -0.33
BRF1-212ENST00000547562 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
BRF1-212ENST00000547562 LURAP1Q96LR2 239 aa13□□□□□ -0.33
BRF1-212ENST00000547562 P0C879 139 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 DAOP14920 347 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 TNFRSF9Q07011 255 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 MSMO1Q15800 293 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 OR2B11Q5JQS5 317 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 SPANXN5Q5MJ07 72 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 LRRC29Q8WV35 223 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 UNKLQ9H9P5 680 aaKnown RBP12.99□□□□□ -0.33
BRF1-212ENST00000547562 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 CADP27708 2225 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 DOCK11Q5JSL3 2073 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 TRAV1-1A0A0B4J248 108 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 KRASP01116 189 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 SRP19P09132 144 aaKnown RBP12.99□□□□□ -0.33
BRF1-212ENST00000547562 G6PCP35575 357 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 ZNF816Q0VGE8 651 aaPredicted RBP12.99□□□□□ -0.33
BRF1-212ENST00000547562 ICAM4Q14773 271 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 ZNF506Q5JVG8 444 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 LILRB2Q8N423 598 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 CD177Q8N6Q3 437 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 OR2Z1Q8NG97 314 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 PSMG3Q9BT73 122 aaPredicted RBP12.99□□□□□ -0.33
BRF1-212ENST00000547562 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
BRF1-212ENST00000547562 BOD1L1Q8NFC6 3051 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 ZNF292O60281 2723 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 SCAF4O95104 1147 aaKnown RBP12.98□□□□□ -0.33
BRF1-212ENST00000547562 MT-ND4LP03901 98 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 OR8U8P0C7N1 319 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 BRWD1-AS2P59051 145 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 PAX5Q02548 391 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 LRRC75BQ2VPJ9 315 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 ZFP82Q8N141 532 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 ISOC2Q96AB3 205 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 RBKSQ9H477 322 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 PUS1Q9Y606 427 aaKnown RBP eCLIP12.98□□□□□ -0.33
BRF1-212ENST00000547562 PPIHO43447 177 aaKnown RBP12.98□□□□□ -0.33
BRF1-212ENST00000547562 S1PR2O95136 353 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
BRF1-212ENST00000547562 EIF2S3P41091 472 aaKnown RBP12.98□□□□□ -0.33
BRF1-212ENST00000547562 MSMPQ1L6U9 139 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 TCTEX1D2Q8WW35 142 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 RPRMQ9NS64 109 aa12.98□□□□□ -0.33
BRF1-212ENST00000547562 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 PRDX2P32119 198 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 RNF212Q495C1 297 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 LINC00518Q8N0U6 118 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 TCTEX1D1Q8N7M0 179 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 PARD6GQ9BYG4 376 aaPredicted RBP12.97□□□□□ -0.33
BRF1-212ENST00000547562 IGHV3-43A0A0B4J1X8 118 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 A0A1W2PPH5 198 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 ODAMA1E959 279 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 LRRC30A6NM36 301 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 CLDN1O95832 211 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 IGHV3-43DP0DP04 118 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 EGR1P18146 543 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 PTAFRP25105 342 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 ZNF83P51522 516 aa12.97□□□□□ -0.33
BRF1-212ENST00000547562 HABP2Q14520 560 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms