RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 PLA1AQ53H76 456 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 LINC00299Q6ZSB3 139 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 ODF3L1Q8IXM7 274 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 SSMEM1Q8WWF3 244 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 SSX3Q99909 188 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 DPAGT1Q9H3H5 408 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 EHFQ9NZC4 300 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 OR2W1Q9Y3N9 320 aa18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 RBM7Q9Y580 266 aaKnown RBP18.71■□□□□ 0.59
SMARCD1-203ENST00000547247 HSD17B6O14756 317 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 RAB29O14966 203 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 HOXA3O43365 443 aaPredicted RBP18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 PMP2P02689 132 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 GAPDHP04406 335 aaKnown RBP18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 OR8U9P0C7N5 309 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 HRH1P35367 487 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 IER3P46695 156 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 RFX2P48378 723 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF816Q0VGE8 651 aaPredicted RBP18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 LRRC75BQ2VPJ9 315 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 OVCH2Q7RTZ1 564 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 OR8U1Q8NH10 309 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 FAM216AQ8WUB2 273 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 ABHD14BQ96IU4 210 aa18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 RBMX2Q9Y388 322 aaKnown RBP18.7■□□□□ 0.58
SMARCD1-203ENST00000547247 VGLL3A8MV65 326 aa18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF736B4DX44 427 aaPredicted RBP18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 OR8H3Q8N146 312 aa18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 ABCB10Q9NRK6 738 aa18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF107Q9UII5 783 aaPredicted RBP18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF221Q9UK13 617 aa18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 RNF150Q9ULK6 438 aa18.69■□□□□ 0.58
SMARCD1-203ENST00000547247 SAA2-SAA4A0A096LPE2 208 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TUSC2O75896 110 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 SAA2P0DJI9 122 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 FCGR2CP31995 323 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 REG1BP48304 166 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 DYRK1AQ13627 763 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 ACTBL2Q562R1 376 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TGIF2LXQ8IUE1 241 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 Q8N402 240 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 RTN4IP1Q8WWV3 396 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 S1PR3Q99500 378 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 POMT1Q9Y6A1 747 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 BTBD17A6NE02 478 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TXNL1O43396 289 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 LANCL1O43813 399 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 IGHV4-59P01825 116 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 BRS3P32247 399 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 DYNLT3P51808 116 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 LUMP51884 338 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TMEM86BQ8N661 226 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TMEM229BQ8NBD8 167 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 GIMAP1Q8WWP7 306 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 THAP7Q9BT49 309 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 ESM1Q9NQ30 184 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 TAS2R8Q9NYW2 309 aa18.68■□□□□ 0.58
SMARCD1-203ENST00000547247 DNAJC9-AS1A6NH13 148 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 J3QRK9 145 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 CD3DP04234 171 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 TBPP20226 339 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 GPR12P47775 334 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 TAS2R19P59542 299 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF45Q02386 682 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 DHRS11Q6UWP2 260 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF833PQ6ZTB9 187 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 ZDHHC22Q8N966 263 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 OR5R1Q8NH85 324 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 DUX5Q96PT3 197 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 OR2D2Q9H210 308 aa18.67■□□□□ 0.58
SMARCD1-203ENST00000547247 IGHV1-3A0A0C4DH29 117 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 A0A1W2PPI3 338 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 H3BUX3 64 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 VENTXO95231 258 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 CSF1P09603 554 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 RAB13P51153 203 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 SLC9A3R2Q15599 337 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 RNASE10Q5GAN6 216 aaKnown RBP18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 FAM71F2Q6NXP2 309 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 OR6F1Q8NGZ6 308 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF251Q9BRH9 671 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 SRRQ9GZT4 340 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 TNFRSF19Q9NS68 423 aa18.66■□□□□ 0.58
SMARCD1-203ENST00000547247 CLDN34H7C241 214 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 M0QYG6 137 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 TIMM23O14925 209 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 PPYP01298 95 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 AADACP22760 399 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 TSPAN5P62079 268 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 RPL39P5Q59GN2 51 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 VAX1Q5SQQ9 334 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 MOB3BQ86TA1 216 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 GDPD1Q8N9F7 314 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 PIFOQ8TCI5 191 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 GAB2Q9UQC2 676 aa18.65■□□□□ 0.58
SMARCD1-203ENST00000547247 IFNA6P05013 189 aa18.64■□□□□ 0.58
SMARCD1-203ENST00000547247 ZNF660Q6AZW8 331 aaPredicted RBP18.64■□□□□ 0.58
SMARCD1-203ENST00000547247 STEAP1BQ6NZ63 245 aa18.64■□□□□ 0.58
SMARCD1-203ENST00000547247 OR56B4Q8NH76 319 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms