RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HPGDSO60760 199 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 PRSS3P35030 304 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 RELBQ01201 579 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 IZUMO1Q8IYV9 350 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 DRAM1Q8N682 238 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 OR4F5Q8NH21 305 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 C15orf40Q8WUR7 153 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 MAFIPQ8WZ33 124 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 RBM14Q96PK6 669 aaKnown RBP11.6□□□□□ -0.55
DDX54-203ENST00000546869 S1PR3Q99500 378 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
DDX54-203ENST00000546869 SCPEP1Q9HB40 452 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 BEX1Q9HBH7 125 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 NDUFA13Q9P0J0 144 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 RSL24D1Q9UHA3 163 aaKnown RBP11.6□□□□□ -0.55
DDX54-203ENST00000546869 ANAPC10Q9UM13 185 aa11.6□□□□□ -0.55
DDX54-203ENST00000546869 SULT1C2O00338 296 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 BET1O15155 118 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 CHST1O43916 411 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 OR2F2O95006 317 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 NAT1P18440 290 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 RAG2P55895 527 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 Q6ZSV7 163 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
DDX54-203ENST00000546869 Q8N2B8 174 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.59□□□□□ -0.55
DDX54-203ENST00000546869 BEST4Q8NFU0 473 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 NPFFR1Q9GZQ6 430 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 NXF2Q9GZY0 626 aaKnown RBP11.59□□□□□ -0.55
DDX54-203ENST00000546869 RABL2AQ9UBK7 228 aaPredicted RBP11.59□□□□□ -0.55
DDX54-203ENST00000546869 RABL2BQ9UNT1 228 aa11.59□□□□□ -0.55
DDX54-203ENST00000546869 SAA2-SAA4A0A096LPE2 208 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 M0QZK8 103 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 CTDSP2O14595 271 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 SNRNP70P08621 437 aaKnown RBP11.58□□□□□ -0.56
DDX54-203ENST00000546869 SAA2P0DJI9 122 aaPredicted RBP11.58□□□□□ -0.56
DDX54-203ENST00000546869 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 MOB3BQ86TA1 216 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 OR56B4Q8NH76 319 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 LINC01006Q8NI28 216 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 GPX8Q8TED1 209 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 CAPSLQ8WWF8 208 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 PARP12Q9H0J9 701 aaKnown RBP11.58□□□□□ -0.56
DDX54-203ENST00000546869 MIXL1Q9H2W2 232 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 A3GALT2U3KPV4 340 aa11.58□□□□□ -0.56
DDX54-203ENST00000546869 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 FAM25AB3EWG3 89 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 FAM25CB3EWG5 89 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 FAM25GB3EWG6 89 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 PROP1O75360 226 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 PTHLHP12272 177 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 CD24P25063 80 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 OR3A3P47888 321 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 REG1BP48304 166 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 TMEM219Q86XT9 240 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 Q8N6K4 173 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 GVQW1Q8N7I0 195 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 OR5AP2Q8NGF4 316 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 OR8H1Q8NGG4 311 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 DGCR14Q96DF8 476 aaKnown RBP11.57□□□□□ -0.56
DDX54-203ENST00000546869 NABP2Q9BQ15 211 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
DDX54-203ENST00000546869 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 RGS5O15539 181 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 FGF16O43320 207 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 TUSC2O75896 110 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 SLC22A5O76082 557 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 MOSP00540 346 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 IGKV1D-33P01593 117 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 IGKV1-33P01594 117 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 CT45A6P0DMU7 189 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 CT45A5P0DMU8 189 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 CT45A7P0DMV0 189 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 MC5RP33032 325 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 LSAMPQ13449 338 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 C12orf54Q6X4T0 127 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 SNAPC3Q92966 411 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 ABHD14BQ96IU4 210 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
DDX54-203ENST00000546869 SLC25A33Q9BSK2 321 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 PRSS22Q9GZN4 317 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 NECAP2Q9NVZ3 263 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 EXTL2Q9UBQ6 330 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 MRPS7Q9Y2R9 242 aaKnown RBP11.56□□□□□ -0.56
DDX54-203ENST00000546869 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
DDX54-203ENST00000546869 OR5H14A6NHG9 310 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 OR8U9P0C7N5 309 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 TMEM11P17152 192 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 MDKP21741 143 aaPredicted RBP11.55□□□□□ -0.56
DDX54-203ENST00000546869 GPR12P47775 334 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 ARPC4P59998 168 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms