RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GINS4Q9BRT9 223 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 AGMATQ9BSE5 352 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 NPFFR1Q9GZQ6 430 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
CCDC38-203ENST00000546803 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
CCDC38-203ENST00000546803 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 ADAM30Q9UKF2 790 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 CUBNO60494 3623 aa13.49□□□□□ -0.25
CCDC38-203ENST00000546803 ATRQ13535 2644 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 CHST1O43916 411 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 TSPAN9O75954 239 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 TPPPO94811 219 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 HLA-DQB1P01920 261 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 PRSS3P35030 304 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 RELBQ01201 579 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 ZNF833PQ6ZTB9 187 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 TMEM219Q86XT9 240 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 BEST4Q8NFU0 473 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 PARP12Q9H0J9 701 aaKnown RBP13.48□□□□□ -0.25
CCDC38-203ENST00000546803 RANBP3Q9H6Z4 567 aaPredicted RBP13.48□□□□□ -0.25
CCDC38-203ENST00000546803 MRPS7Q9Y2R9 242 aaKnown RBP13.48□□□□□ -0.25
CCDC38-203ENST00000546803 MMP24Q9Y5R2 645 aa13.48□□□□□ -0.25
CCDC38-203ENST00000546803 SAA2-SAA4A0A096LPE2 208 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 RGS5O15539 181 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 OR2F2O95006 317 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
CCDC38-203ENST00000546803 SAA2P0DJI9 122 aaPredicted RBP13.47□□□□□ -0.25
CCDC38-203ENST00000546803 PTHLHP12272 177 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 CD24P25063 80 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 CD1BP29016 333 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 EBI3Q14213 229 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 Q6ZSV7 163 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 H1FOOQ8IZA3 346 aaPredicted RBP13.47□□□□□ -0.25
CCDC38-203ENST00000546803 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 C15orf40Q8WUR7 153 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
CCDC38-203ENST00000546803 C16orf95Q9H693 158 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 BEX1Q9HBH7 125 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 IFT46Q9NQC8 304 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 NDUFA13Q9P0J0 144 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 ZNF221Q9UK13 617 aa13.47□□□□□ -0.25
CCDC38-203ENST00000546803 OR3A3P47888 321 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 HES1Q14469 280 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 GVQW1Q8N7I0 195 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.46□□□□□ -0.25
CCDC38-203ENST00000546803 ABHD14BQ96IU4 210 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 ZNF251Q9BRH9 671 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 SLC25A33Q9BSK2 321 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.25
CCDC38-203ENST00000546803 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 ANAPC10Q9UM13 185 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 GAB2Q9UQC2 676 aa13.46□□□□□ -0.25
CCDC38-203ENST00000546803 IGHV3-72A0A0B4J1Y9 119 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 CLPSL1A2RUU4 121 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 M0QZK8 103 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 SULT1C2O00338 296 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 CTDSP2O14595 271 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 IGKV1D-33P01593 117 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 IGKV1-33P01594 117 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 OR8U9P0C7N5 309 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 TMEM11P17152 192 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 GPR12P47775 334 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 ARPC4P59998 168 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 LSAMPQ13449 338 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 OR2T10Q8NGZ9 312 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 OR8U1Q8NH10 309 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 GPX8Q8TED1 209 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC38-203ENST00000546803 NABP2Q9BQ15 211 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 MRPL20Q9BYC9 149 aaKnown RBP13.45□□□□□ -0.26
CCDC38-203ENST00000546803 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 RNF150Q9ULK6 438 aa13.45□□□□□ -0.26
CCDC38-203ENST00000546803 RBM7Q9Y580 266 aaKnown RBP13.45□□□□□ -0.26
CCDC38-203ENST00000546803 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
CCDC38-203ENST00000546803 NAT1P18440 290 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 MDKP21741 143 aaPredicted RBP13.44□□□□□ -0.26
CCDC38-203ENST00000546803 SNX29P2Q8IUI4 249 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 MCFD2Q8NI22 146 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 SNAPC3Q92966 411 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
CCDC38-203ENST00000546803 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 NXF2Q9GZY0 626 aaKnown RBP13.44□□□□□ -0.26
CCDC38-203ENST00000546803 NECAP2Q9NVZ3 263 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 RABL2AQ9UBK7 228 aaPredicted RBP13.44□□□□□ -0.26
CCDC38-203ENST00000546803 RABL2BQ9UNT1 228 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 MOB4Q9Y3A3 225 aa13.44□□□□□ -0.26
CCDC38-203ENST00000546803 MEIS3P1A6NDR6 274 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 MOSP00540 346 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 HNF4GQ14541 408 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 C11orf88Q6PI97 169 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 LAX1Q8IWV1 398 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 Q8N2B8 174 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 OR5AP2Q8NGF4 316 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 OR8H1Q8NGG4 311 aa13.43□□□□□ -0.26
CCDC38-203ENST00000546803 OR2T6Q8NHC8 308 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms