RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SMCO3A2RU48 225 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 C5orf49A4QMS7 147 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 LRP5LA4QPB2 252 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 CD300LBA8K4G0 201 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 CEBPZOSA8MTT3 80 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 TSTD3H0UI37 97 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 ARF1P84077 181 aaKnown RBP9.72□□□□□ -0.85
DDB1-224ENST00000545894 ARL16Q0P5N6 197 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 TMEM41BQ5BJD5 291 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 SPINK14Q6IE38 97 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 OR5A2Q8NGI9 324 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 APOBEC3DQ96AK3 386 aaPredicted RBP9.72□□□□□ -0.85
DDB1-224ENST00000545894 ABHD17AQ96GS6 310 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 HIST1H2AAQ96QV6 131 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 SSX3Q99909 188 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 ABI3Q9P2A4 366 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 MAP1LC3B2A6NCE7 125 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 MKRN2OSH3BPM6 223 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 HS3ST1O14792 307 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 ZNHIT1O43257 154 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 MRPL33O75394 65 aaKnown RBP9.72□□□□□ -0.85
DDB1-224ENST00000545894 IFNA10P01566 189 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 IGKV1-39P01597 117 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 IGKV1D-39P04432 117 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 CCL2P13500 99 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 CYB561P49447 251 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 SSTP61278 116 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 WDR25Q64LD2 544 aaPredicted RBP9.72□□□□□ -0.85
DDB1-224ENST00000545894 REC114Q7Z4M0 266 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 LILRB2Q8N423 598 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 OR10V1Q8NGI7 309 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 RDH5Q92781 318 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 PINX1Q96BK5 328 aaKnown RBP9.72□□□□□ -0.85
DDB1-224ENST00000545894 MAP1LC3BQ9GZQ8 125 aa9.72□□□□□ -0.85
DDB1-224ENST00000545894 DEGS1O15121 323 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 NEURL1O76050 574 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 DDTP30046 118 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 OR1C1Q15619 314 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 OR5R1Q8NH85 324 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 PARD6GQ9BYG4 376 aaPredicted RBP9.71□□□□□ -0.85
DDB1-224ENST00000545894 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.85
DDB1-224ENST00000545894 NAT8Q9UHE5 227 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 MED13Q9UHV7 2174 aa9.71□□□□□ -0.85
DDB1-224ENST00000545894 A0A096LPE4 126 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 TRAV24A0A0B4J272 114 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 ZNF737O75373 536 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 COX5BP10606 129 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 GDF1P27539 372 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 IL2RGP31785 369 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 ARG2P78540 354 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 PMS2P11Q13670 270 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 C9orf135Q5VTT2 229 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 TMEM183AQ8IXX5 376 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 C17orf78Q8N4C9 275 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 IL1F10Q8WWZ1 152 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 ZNF488Q96MN9 340 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 AGMATQ9BSE5 352 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 HES7Q9BYE0 225 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 LINC00470Q9BZP3 86 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 RBKSQ9H477 322 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 SRD5A3Q9H8P0 318 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 RYDENQ9NUL5 291 aaKnown RBP9.71□□□□□ -0.86
DDB1-224ENST00000545894 MRPS18CQ9Y3D5 142 aaKnown RBP9.71□□□□□ -0.86
DDB1-224ENST00000545894 MGAQ8IWI9 3026 aa9.71□□□□□ -0.86
DDB1-224ENST00000545894 NPIPB11E5RHQ5 1161 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 SS18L1O75177 396 aaPredicted RBP9.7□□□□□ -0.86
DDB1-224ENST00000545894 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
DDB1-224ENST00000545894 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 FAM180AQ6UWF9 173 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 IGFL3Q6UXB1 125 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 CYP2G1PQ6ZSU1 146 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 SSX9Q7RTT3 188 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 MDS2Q8NDY4 140 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 OR5P3Q8WZ94 311 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 OR4C12Q96R67 309 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 PRRG4Q9BZD6 226 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 OR1A1Q9P1Q5 309 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 TP53TG5Q9Y2B4 290 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 IGKV3D-15A0A087WSY6 115 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 A0A087X0M5 115 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 A0A1B0GX30 115 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 IGLV2-14P01704 120 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 MDKP21741 143 aaPredicted RBP9.7□□□□□ -0.86
DDB1-224ENST00000545894 TNFSF10P50591 281 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 GFRA1P56159 465 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 ADIRFQ15847 76 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 TMEM241Q24JQ0 296 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 SPANXN5Q5MJ07 72 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 ZNF573Q86YE8 665 aa9.7□□□□□ -0.86
DDB1-224ENST00000545894 FAM58AQ8N1B3 248 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms