RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 RSRP1Q9BUV0 290 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 ALX4Q9H161 411 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 TMEM160Q9NX00 188 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF221Q9UK13 617 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 KCNS2Q9ULS6 477 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 C14orf166Q9Y224 244 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 LINC00854A0A1B0GVQ3 168 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 RNF212BA8MTL3 300 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 GPR31O00270 319 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 TCRBP04435 133 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 LTC4SQ16873 150 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 BVESQ8NE79 360 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 OR10X1Q8NGY0 326 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 UBALD1Q8TB05 177 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 IFI27L2Q9H2X8 130 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 FAM212BQ9NTI7 297 aaPredicted RBP13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 ITGB1BP2Q9UKP3 347 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 GPR132Q9UNW8 380 aa13.07□□□□□ -0.32
PRPF40A-212ENST00000545856 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 GPR12P47775 334 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 OXA1LQ15070 435 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 CT45A1Q5HYN5 189 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 CT45A3Q8NHU0 189 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 TMPRSS13Q9BYE2 586 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 SLC5A7Q9GZV3 580 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
PRPF40A-212ENST00000545856 MAST4O15021 2626 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 PRAF2O60831 178 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 OR8U9P0C7N5 309 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 HTR1DP28221 377 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 ARHGDIBP52566 201 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 FXYD4P59646 89 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 ABCA11PQ4W5N1 156 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 CCDC144NLQ6NUI1 221 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 KCTD9Q7L273 389 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 CENPSQ8N2Z9 138 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 PNKDQ8N490 385 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 OR8U1Q8NH10 309 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 SECTM1Q8WVN6 248 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 TOMM40LQ969M1 308 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 MRGPRFQ96AM1 343 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 HSD17B10Q99714 261 aaKnown RBP13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 MARVELD1Q9BSK0 173 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 OR2D2Q9H210 308 aa13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF469Q96JG9 3925 aaPredicted RBP13.05□□□□□ -0.32
PRPF40A-212ENST00000545856 RNASEK-C17orf49H0YIS7 233 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 PGAM2P15259 253 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 EPHA1P21709 976 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 GNRHRP30968 328 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 CCR6P51684 374 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF134P52741 427 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 LGALS4P56470 323 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF816Q0VGE8 651 aaPredicted RBP13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 CATR1Q13166 79 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 SCGB2A2Q13296 93 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 TRIM16LQ309B1 348 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 HCP5Q6MZN7 132 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 OR4P4Q8NGL7 312 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 MARCH1Q8TCQ1 289 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 DPM3Q9P2X0 92 aa13.04□□□□□ -0.32
PRPF40A-212ENST00000545856 IGKV1D-13A0A0B4J2D9 117 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 IGHV1-69DA0A0B4J2H0 117 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 ST8SIA5O15466 376 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 PEX14O75381 377 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 IGHV1-69P01742 117 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 IGKV1-13P0DP09 117 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 GNG10P50151 68 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 TMEM128Q5BJH2 165 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 C5orf24Q7Z6I8 188 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 OR8H3Q8N146 312 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 MAPK1IP1LQ8NDC0 245 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 NANPQ8TBE9 248 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 ST6GALNAC6Q969X2 333 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 TMUB1Q9BVT8 246 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 PARP12Q9H0J9 701 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 C5orf66Q9H5L9 145 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 SLC2A9Q9NRM0 540 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
PRPF40A-212ENST00000545856 CELSR1Q9NYQ6 3014 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms