RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 FAM71F2Q6NXP2 309 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 ZNF880Q6PDB4 577 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 TMEM91Q6ZNR0 172 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 ZNF833PQ6ZTB9 187 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 C5orf24Q7Z6I8 188 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 CYYR1Q96J86 154 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 PRR25Q96S07 402 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 MRPL20Q9BYC9 149 aaKnown RBP12.68□□□□□ -0.38
DDX55-212ENST00000544738 CCDC90BQ9GZT6 254 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 HSF4Q9ULV5 492 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 HYDINQ4G0P3 5121 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 SAA2-SAA4A0A096LPE2 208 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 TRBV6-6A0A0A6YYG2 114 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 RAB29O14966 203 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 NBR2O15453 112 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 SAA2P0DJI9 122 aaPredicted RBP12.67□□□□□ -0.38
DDX55-212ENST00000544738 SLC2A2P11168 524 aaPredicted RBP12.67□□□□□ -0.38
DDX55-212ENST00000544738 CPEP16870 476 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 CFHR3Q02985 330 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 MLLT11Q13015 90 aaPredicted RBP12.67□□□□□ -0.38
DDX55-212ENST00000544738 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 PRSS48Q7RTY5 328 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 SETD6Q8TBK2 473 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
DDX55-212ENST00000544738 CSMD3Q7Z407 3707 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 ITGB1BP1O14713 200 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 RAMP3O60896 148 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 HLA-DRB1P01911 266 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 CRHBPP24387 322 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 PSMB8P28062 276 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 OR3A3P47888 321 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 HSPA13P48723 471 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 PSMD7P51665 324 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 RPS25P62851 125 aaKnown RBP12.66□□□□□ -0.38
DDX55-212ENST00000544738 P2RY14Q15391 338 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 RAB11BQ15907 218 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 LIN54Q6MZP7 749 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 NPBQ8NG41 125 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 KCTD7Q96MP8 289 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 MGLLQ99685 303 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 KCNK15Q9H427 330 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 ACOT13Q9NPJ3 140 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 KIAA1456Q9P272 454 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 SLC23A1Q9UHI7 598 aa12.66□□□□□ -0.38
DDX55-212ENST00000544738 SOCS1O15524 211 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 ZBTB25P24278 435 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 MC5RP33032 325 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 RAB25P57735 213 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 TMEM65Q6PI78 240 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 C4orf3Q8WVX3 66 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 EDARADDQ8WWZ3 215 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
DDX55-212ENST00000544738 RCHY1Q96PM5 261 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 GFI1Q99684 422 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 C12orf4Q9NQ89 552 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 AK3Q9UIJ7 227 aa12.65□□□□□ -0.38
DDX55-212ENST00000544738 AK6Q9Y3D8 172 aaKnown RBP12.65□□□□□ -0.38
DDX55-212ENST00000544738 A0A0A6YYD4 124 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 ERICH4A6NGS2 130 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 OR5H14A6NHG9 310 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 ST8SIA5O15466 376 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 HSPA12AO43301 675 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 NDUFA3O95167 84 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 CALRP27797 417 aaKnown RBP12.64□□□□□ -0.39
DDX55-212ENST00000544738 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
DDX55-212ENST00000544738 CEACAM6P40199 344 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 RITA1Q96K30 269 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 AGMATQ9BSE5 352 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 V9GY05 133 aa12.64□□□□□ -0.39
DDX55-212ENST00000544738 STARD9Q9P2P6 4700 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 IGHV7-81A0A0B4J1V7 117 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 ATP6V0E1O15342 81 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 RBBP9O75884 186 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 CNTFRP26992 372 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 VEGFCP49767 419 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 HLA-DRB3P79483 266 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 FABP5Q01469 135 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 DEFB136Q30KP8 78 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 FAM131AQ6UXB0 335 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 RNF5Q99942 180 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 CMSS1Q9BQ75 279 aaKnown RBP12.63□□□□□ -0.39
DDX55-212ENST00000544738 Q9N2K0 584 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
DDX55-212ENST00000544738 TRAV41A0A0B4J266 112 aa12.62□□□□□ -0.39
DDX55-212ENST00000544738 FOXI3A8MTJ6 420 aaPredicted RBP12.62□□□□□ -0.39
DDX55-212ENST00000544738 DENRO43583 198 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms