RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TSSK6Q9BXA6 273 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ANKRD60Q9BZ19 345 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 WFDC10AQ9H1F0 79 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 OR51V1Q9H2C8 321 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 PPIL3Q9H2H8 161 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 NEK6Q9HC98 313 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 HMG20AQ9NP66 347 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 RAB9BQ9NP90 201 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ZC4H2Q9NQZ6 224 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 CMC2Q9NRP2 79 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF355PQ9NSJ1 428 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TECRQ9NZ01 308 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 CNOT2Q9NZN8 540 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 PEF1Q9UBV8 284 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 FBXL17Q9UF56 701 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 APLNQ9ULZ1 77 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TNFRSF18Q9Y5U5 241 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM14AQ9Y6G1 99 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 IGKV1-27A0A075B6S5 117 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 A0A1W2PPE3 182 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF736B4DX44 427 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 IGLL5B9A064 214 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SDCBPO00560 298 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SELENOFO60613 162 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 GMNNO75496 209 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KRT36O76013 467 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KDM4BO94953 1096 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 NDUFA3O95167 84 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 OCM2P0CE71 109 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 OCMP0CE72 109 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 P0DMU3 169 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 FAM231AP0DMU4 169 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 FAM231CP0DMU5 169 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 ALOX5APP20292 161 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PRKACBP22694 351 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 RRM2P31350 389 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 MTCP1P56278 107 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PDZK1IP1Q13113 114 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PLGLAQ15195 96 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 MED22Q15528 200 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 UBE2V2Q15819 145 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 LRRC36Q1X8D7 754 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 DEFB135Q30KP9 77 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM30BQ3MIR4 351 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PAN3Q58A45 887 aaKnown RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SLC35D3Q5M8T2 416 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 BCL2L15Q5TBC7 163 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 UNQ5815/PRO19632Q6UWF5 114 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 NOXA1Q86UR1 476 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PPP1R27Q86WC6 154 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 POM121L12Q8N7R1 296 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 POC5Q8NA72 575 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 NPBQ8NG41 125 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 OR52B4Q8NGK2 314 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 RFESDQ8TAC1 157 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 TEX47Q8TBZ9 253 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 CASTOR1Q8WTX7 329 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 PP6455Q8WZ26 134 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM18Q96B42 140 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SPSB1Q96BD6 273 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 RCN3Q96D15 328 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 ASB9Q96DX5 294 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 USMG5Q96IX5 58 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 C7orf34Q96L11 122 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SIKE1Q9BRV8 207 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 YIPF3Q9GZM5 350 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 CHST5Q9GZS9 411 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 C11orf68Q9H3H3 251 aaKnown RBP3.02□□□□□ -1.93
SNHG1-220ENST00000544550 KIF25Q9UIL4 384 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 OR52A1Q9UKL2 312 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 SNX5Q9Y5X3 404 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 NUBP2Q9Y5Y2 271 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 A3GALT2U3KPV4 340 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
SNHG1-220ENST00000544550 A0A1B0GTI1 187 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM272A0A1B0GTI8 110 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 A6NIN4 97 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 EPM2AB3EWF7 344 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 PTGES3LE9PB15 166 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 H0YJX3 145 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 SYT7O43581 403 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 LANCL1O43813 399 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 DIRAS1O95057 198 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 OR2C1O95371 312 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 RBMY1A1P0DJD3 496 aaKnown RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 INAFM2P0DMQ5 153 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 CALCBP10092 127 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 DBTP11182 482 aaKnown RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 CCL1P22362 96 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 SSTR5P35346 364 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 ALDH3A2P51648 485 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 MFAP2P55001 183 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 NANOS2P60321 138 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms