RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 Q8N402 240 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR8U1Q8NH10 309 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SSMEM1Q8WWF3 244 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 JMJD8Q96S16 334 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DPAGT1Q9H3H5 408 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GHITMQ9H3K2 345 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 PRDM13Q9H4Q3 707 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF221Q9UK13 617 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZFHX3Q15911 3703 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 MTORP42345 2549 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SAA2-SAA4A0A096LPE2 208 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 H3BUX3 64 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GAPDHP04406 335 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CSF1P09603 554 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SAA2P0DJI9 122 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 BRS3P32247 399 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IER3P46695 156 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GPR12P47775 334 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LUMP51884 338 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TAS2R19P59542 299 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TSPAN5P62079 268 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF45Q02386 682 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OVCH2Q7RTZ1 564 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 MOB3BQ86TA1 216 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RTN4IP1Q8WWV3 396 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 AGMATQ9BSE5 352 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 THAP7Q9BT49 309 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TAS2R8Q9NYW2 309 aa11.69□□□□□ -0.54
TNFRSF1A-216ENST00000543995 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 M0QYG6 137 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CD3DP04234 171 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IFNA6P05013 189 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RAB13P51153 203 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF137PP52743 207 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 HILS1P60008 231 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF816Q0VGE8 651 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DYRK1AQ13627 763 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RNASE10Q5GAN6 216 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR8H3Q8N146 312 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TMEM229BQ8NBD8 167 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 S1PR3Q99500 378 aa11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TXNL1O43396 289 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LANCL1O43813 399 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 PPYP01298 95 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 AADACP22760 399 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 FXYD4P59646 89 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 HERV-K104P61576 105 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SLC9A3R2Q15599 337 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 AANATQ16613 207 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR6F1Q8NGZ6 308 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 FAM216AQ8WUB2 273 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF2Q9BSG1 426 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SRRQ9GZT4 340 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-216ENST00000543995 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TIMM23O14925 209 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TUSC2O75896 110 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 VENTXO95231 258 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RAB3DO95716 219 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TBPP20226 339 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LY6EQ16553 131 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 VAX1Q5SQQ9 334 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 STEAP1BQ6NZ63 245 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DHRS11Q6UWP2 260 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TMEM17Q86X19 198 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR56B4Q8NH76 319 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR5R1Q8NH85 324 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SECTM1Q8WVN6 248 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 S100ZQ8WXG8 99 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TINAGL1Q9GZM7 467 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CUBNO60494 3623 aa11.66□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 AKAIN1P0CW23 69 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CD24P25063 80 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 INPP1P49441 399 aa11.65□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DYNLT3P51808 116 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms