RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 IGHV3OR16-10A0A075B7F0 116 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 IGHV1-69DA0A0B4J2H0 117 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 CENPVL3A0A0U1RRI6 287 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 FAM240BA0A1B0GVZ2 78 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 HSD17B6O14756 317 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 NPFFO15130 113 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 SLC31A2O15432 143 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 IGHV1-69P01742 117 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 ZNF735P0CB33 412 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 MIDNQ504T8 468 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 CT45A1Q5HYN5 189 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 CMTM1Q8IZ96 169 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 ZNF439Q8NDP4 499 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 ZFAND1Q8TCF1 268 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 RPEQ96AT9 228 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 ABHD14BQ96IU4 210 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
DDB1-223ENST00000543658 MS4A7Q9GZW8 240 aaPredicted RBP9.69□□□□□ -0.86
DDB1-223ENST00000543658 PARP12Q9H0J9 701 aaKnown RBP9.69□□□□□ -0.86
DDB1-223ENST00000543658 FXYD6Q9H0Q3 95 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 COPZ2Q9P299 210 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 RNF150Q9ULK6 438 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 TBC1D24Q9ULP9 559 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
DDB1-223ENST00000543658 OR5H14A6NHG9 310 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 ODF3BA8MYP8 253 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 LEUTXA8MZ59 168 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 BUB1B-PAK6H3BSN5 160 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 PLA2G10O15496 165 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 TXNL1O43396 289 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 EPHA1P21709 976 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 BPIFB3P59826 476 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 IFITM3Q01628 133 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 SCGB2A2Q13296 93 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 SURF2Q15527 256 aaPredicted RBP9.68□□□□□ -0.86
DDB1-223ENST00000543658 PLA1AQ53H76 456 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 ZNF660Q6AZW8 331 aaPredicted RBP9.68□□□□□ -0.86
DDB1-223ENST00000543658 HCP5Q6MZN7 132 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 FAM71F2Q6NXP2 309 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 LHFPL1Q86WI0 220 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 CCDC71LQ8N9Z2 235 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.68□□□□□ -0.86
DDB1-223ENST00000543658 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 MARCH1Q8TCQ1 289 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 AKR1E2Q96JD6 320 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 DPM3Q9P2X0 92 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 NUP50Q9UKX7 468 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 FAM96BQ9Y3D0 163 aa9.68□□□□□ -0.86
DDB1-223ENST00000543658 AKAP9Q99996 3911 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 IGKV1D-13A0A0B4J2D9 117 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 GPR31O00270 319 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 LY6G6DO95868 133 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 IGLV1-47P01700 117 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
DDB1-223ENST00000543658 IGHV4-38-2P0DP08 117 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 IGKV1-13P0DP09 117 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 SAA4P35542 130 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 CCR6P51684 374 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 ZNF134P52741 427 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 UCP3P55916 312 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 BAMBIQ13145 260 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 CATR1Q13166 79 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 RGS21Q2M5E4 152 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 FAM120AOSQ5T036 256 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 UTF1Q5T230 341 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 CCDC144NLQ6NUI1 221 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 C11orf88Q6PI97 169 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 BRD3OSQ6XYD6 125 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 TGIF2LXQ8IUE1 241 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 ZDHHC22Q8N966 263 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 ZNF486Q96H40 463 aaPredicted RBP9.67□□□□□ -0.86
DDB1-223ENST00000543658 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 ZNRD1Q9P1U0 126 aa9.67□□□□□ -0.86
DDB1-223ENST00000543658 MAP1AP78559 2803 aaPredicted RBP9.67□□□□□ -0.86
DDB1-223ENST00000543658 RNF212BA8MTL3 300 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 M0R1X1 148 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 PTTG1O95997 202 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 AVPP01185 164 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 GAPDHP04406 335 aaKnown RBP9.66□□□□□ -0.86
DDB1-223ENST00000543658 RLN1P04808 185 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 CBX3Q13185 183 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 MSMO1Q15800 293 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 RPL39P5Q59GN2 51 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 AADACL3Q5VUY0 350 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 PLET1Q6UQ28 207 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 IL17RELQ6ZVW7 336 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 TMED4Q7Z7H5 227 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 OR13C8Q8NGS7 320 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 SMR3AQ99954 134 aa9.66□□□□□ -0.86
DDB1-223ENST00000543658 HILPDAQ9Y5L2 63 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms