RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 DNAH9Q9NYC9 4486 aa10.25□□□□□ -0.77
RTN3-213ENST00000543552 TMEM14DPA8MWL7 114 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 HSPA12AO43301 675 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 RBBP9O75884 186 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 NDUFA3O95167 84 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 ARSBP15848 533 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 PPIFP30405 207 aaKnown RBP10.24□□□□□ -0.77
RTN3-213ENST00000543552 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 UNC119Q13432 240 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 FAM131AQ6UXB0 335 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 OR11H1Q8NG94 326 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 C12orf4Q9NQ89 552 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 RNF150Q9ULK6 438 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
RTN3-213ENST00000543552 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
RTN3-213ENST00000543552 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 H7C2Y5 167 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
RTN3-213ENST00000543552 ZBTB25P24278 435 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 ECI1P42126 302 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 TMEM267Q0VDI3 215 aaPredicted RBP10.23□□□□□ -0.77
RTN3-213ENST00000543552 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
RTN3-213ENST00000543552 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 ZNF491Q8N8L2 437 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 OR1N2Q8NGR9 330 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 HSF4Q9ULV5 492 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
RTN3-213ENST00000543552 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
RTN3-213ENST00000543552 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
RTN3-213ENST00000543552 G3V318 75 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 I3L521 148 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 SLC17A2O00624 439 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 RRHO14718 337 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 CD37P11049 281 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 CNTFRP26992 372 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 CD40LGP29965 261 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 RAB9AP51151 201 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 PSMD7P51665 324 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 HLA-DRB3P79483 266 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
RTN3-213ENST00000543552 QRFPP83859 136 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 RAB11BQ15907 218 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 ABHD5Q8WTS1 349 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 TMEM203Q969S6 136 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 RNF5Q99942 180 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 LPAR5Q9H1C0 372 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 ISYNA1Q9NPH2 558 aa10.22□□□□□ -0.77
RTN3-213ENST00000543552 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
RTN3-213ENST00000543552 H0YJW9 148 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 RGS10O43665 173 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 SPDEFO95238 335 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 HSMCR30P0CW71 290 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 CEACAM6P40199 344 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 CRIP2P52943 208 aaPredicted RBP10.21□□□□□ -0.77
RTN3-213ENST00000543552 TPBGQ13641 420 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 IRF3Q14653 427 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 P2RY14Q15391 338 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 RPL39P5Q59GN2 51 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 ZNF429Q86V71 674 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 RITA1Q96K30 269 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 PRR25Q96S07 402 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 TSNAXQ99598 290 aaKnown RBP10.21□□□□□ -0.77
RTN3-213ENST00000543552 KLK15Q9H2R5 256 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 KCNK15Q9H427 330 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 GNB4Q9HAV0 340 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
RTN3-213ENST00000543552 A0A1W2PN81 502 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 SOCS1O15524 211 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 LY86O95711 162 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 APOA2P02652 100 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CPEP16870 476 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CHRNA7P36544 502 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 SERPINB10P48595 397 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 CX3CL1P78423 397 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 MLLT11Q13015 90 aaPredicted RBP10.2□□□□□ -0.78
RTN3-213ENST00000543552 CD200R1LQ6Q8B3 271 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 C5orf24Q7Z6I8 188 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 PTX4Q96A99 478 aa10.2□□□□□ -0.78
RTN3-213ENST00000543552 RBMXL1Q96E39 390 aaKnown RBP10.2□□□□□ -0.78
RTN3-213ENST00000543552 ABHD14BQ96IU4 210 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms