RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 FAM219AQ8IW50 185 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 ZNF645Q8N7E2 425 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 SLC35G3Q8N808 338 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 C19orf12Q9NSK7 152 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 JPT1Q9UK76 154 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 PSG11Q9UQ72 335 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 ARFGEF3Q5TH69 2177 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 KIAA2026Q5HYC2 2103 aa9.11□□□□□ -0.95
SCG3-202ENST00000542355 F2RL2O00254 374 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 NDUFA2O43678 99 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 RP2O75695 350 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 CDS2O95674 445 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 CXCL2P19875 107 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 ZNF546Q86UE3 836 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 IQCF2Q8IXL9 164 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 H1FXQ92522 213 aaKnown RBP9.1□□□□□ -0.95
SCG3-202ENST00000542355 CORO2AQ92828 525 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 ABHD14BQ96IU4 210 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 TMEM56Q96MV1 263 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 TMEM56-RWDD3S4R434 201 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 DSCAMO60469 2012 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 ABCA4P78363 2273 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
SCG3-202ENST00000542355 HMSDA8MTL9 139 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 H0Y980 276 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 L7N2F9 121 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 UBE2CO00762 179 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 YPEL1O60688 119 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 MPC2O95563 127 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 NFYBP25208 207 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 UCP1P25874 307 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 CDKN1AP38936 164 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 ERVFRD-1P60508 538 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 UTF1Q5T230 341 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 AVPI1Q5T686 147 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 SELENOHQ8IZQ5 122 aaKnown RBP9.1□□□□□ -0.95
SCG3-202ENST00000542355 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 NEU4Q8WWR8 484 aaPredicted RBP9.1□□□□□ -0.95
SCG3-202ENST00000542355 LEAP2Q969E1 77 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 AGMATQ9BSE5 352 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 PRDM13Q9H4Q3 707 aa9.1□□□□□ -0.95
SCG3-202ENST00000542355 LRBAP50851 2863 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 ZNF729A6NN14 1252 aaPredicted RBP9.09□□□□□ -0.95
SCG3-202ENST00000542355 MMP23AO75900 390 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 SERPINE2P07093 398 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 DAOP14920 347 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 ZNF134P52741 427 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 AP2S1P53680 142 aaPredicted RBP9.09□□□□□ -0.95
SCG3-202ENST00000542355 SRPXP78539 464 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
SCG3-202ENST00000542355 ZNF273Q14593 569 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 C5orf30Q96GV9 206 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 RAB9BQ9NP90 201 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 TMED3Q9Y3Q3 217 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 LINC00312Q9Y6C7 94 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 KCNAB3O43448 404 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 IGHV2-70P01814 119 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 SLC25A4P12235 298 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 CCL3L1P16619 93 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 IL15RAQ13261 267 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 RAB32Q13637 225 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 BTNL3Q6UXE8 466 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 RBPMSQ93062 196 aaKnown RBP9.09□□□□□ -0.95
SCG3-202ENST00000542355 RNF126Q9BV68 326 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 MFFQ9GZY8 342 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 ZMAT4Q9H898 229 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 PLEKHF2Q9H8W4 249 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 SDHAF2Q9NX18 166 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 GFOD1Q9NXC2 390 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 IDI2-AS1Q9NZ38 188 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 MBD2Q9UBB5 411 aa9.09□□□□□ -0.95
SCG3-202ENST00000542355 A0A1W2PPE3 182 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 H0YIZ8 118 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 PPIHO43447 177 aaKnown RBP9.08□□□□□ -0.96
SCG3-202ENST00000542355 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
SCG3-202ENST00000542355 LINC00205P59089 165 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 S100A10P60903 97 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 PRAMEF5Q5TYX0 476 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 TMEM65Q6PI78 240 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 GON7Q9BXV9 100 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 TAS2R3Q9NYW6 316 aa9.08□□□□□ -0.96
SCG3-202ENST00000542355 RAI1Q7Z5J4 1906 aaPredicted RBP9.08□□□□□ -0.96
SCG3-202ENST00000542355 SLC31A2O15432 143 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 NDUFS7O75251 213 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 SNAPC5O75971 98 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 FSTL3O95633 263 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 GPR12P47775 334 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 RPL30P62888 115 aaKnown RBP9.07□□□□□ -0.96
SCG3-202ENST00000542355 MRPS11P82912 194 aaKnown RBP9.07□□□□□ -0.96
SCG3-202ENST00000542355 Q3ZCU0 254 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 CT83Q5H943 113 aa9.07□□□□□ -0.96
SCG3-202ENST00000542355 OR2B11Q5JQS5 317 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms