RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TMEM187Q14656 261 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 ODF4Q2M2E3 257 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 SPATS1Q496A3 300 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 ATAD3CQ5T2N8 411 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 ELP2Q6IA86 826 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 LAMTOR1Q6IAA8 161 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 SPATA12Q7Z6I5 190 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 SERPINA12Q8IW75 414 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 OR9Q2Q8NGE9 314 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 OR5D18Q8NGL1 313 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 TMEM163Q8TC26 289 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 RFT1Q96AA3 541 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 PYURFQ96I23 114 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 BTBD10Q9BSF8 475 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 FGFR1OP2Q9NVK5 253 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 GAB2Q9UQC2 676 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 WASHC3Q9Y3C0 194 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 DEFB131BA0A096LNP1 70 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.91□□□□□ -1.3
YBX3-211ENST00000541351 TRAV39A0A0B4J263 110 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 SMIM31A0A1B0GVY4 71 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 OR4C46A6NHA9 309 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 ZNF670-ZNF695F2Z2N8 137 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 SULT1B1O43704 296 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 MT-ND2P03891 347 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 MYOD1P15172 320 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 NPY1RP25929 384 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 OR3A3P47888 321 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 PSMD7P51665 324 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 ZNF134P52741 427 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 HMGA2P52926 109 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 HCCSP53701 268 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 CXCR4P61073 352 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 SLC25A30Q5SVS4 291 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 LIPKQ5VXJ0 399 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 GLYATQ6IB77 296 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 FAM131AQ6UXB0 335 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 ASCL4Q6XD76 172 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 ZNF833PQ6ZTB9 187 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 Q6ZTC4 211 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 CPOQ8IVL8 374 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 ARHGAP24Q8N264 748 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 SUMF2Q8NBJ7 301 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 UXS1Q8NBZ7 420 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 OR10V1Q8NGI7 309 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 FAM210BQ96KR6 192 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 CNN2Q99439 309 aaKnown RBP6.91□□□□□ -1.3
YBX3-211ENST00000541351 PHB2Q99623 299 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 NICN1Q9BSH3 213 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 OR2S2Q9NQN1 319 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 PIPOXQ9P0Z9 390 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 TRAPPC2LQ9UL33 140 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 EXOSC1Q9Y3B2 195 aaKnown RBP6.91□□□□□ -1.3
YBX3-211ENST00000541351 V9GYQ6 96 aa6.91□□□□□ -1.3
YBX3-211ENST00000541351 IGKV1-9A0A0C4DH69 117 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 ZNF320A2RRD8 509 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 A8MWP6 167 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 OR7C1O76099 320 aaPredicted RBP6.9□□□□□ -1.3
YBX3-211ENST00000541351 CD74P04233 296 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 MRPL3P09001 348 aaKnown RBP6.9□□□□□ -1.3
YBX3-211ENST00000541351 MAGEA2P43356 314 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 RHOGP84095 191 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 CNPY1Q3B7I2 92 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 TMEM244Q5VVB8 128 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 BTNL8Q6UX41 500 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 C6orf223Q8N319 242 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 PRR18Q8N4B5 295 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 SETD9Q8NE22 299 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 OR2AK2Q8NG84 335 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 CD300LFQ8TDQ1 290 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 CCDC107Q8WV48 283 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 APOL4Q9BPW4 351 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 TTTY10Q9BZA0 68 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 C5orf66Q9H5L9 145 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 IFT22Q9H7X7 185 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 MRPL27Q9P0M9 148 aaKnown RBP6.9□□□□□ -1.3
YBX3-211ENST00000541351 MLXQ9UH92 298 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 UBQLN2Q9UHD9 624 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 JPT1Q9UK76 154 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 BOLA1Q9Y3E2 137 aa6.9□□□□□ -1.3
YBX3-211ENST00000541351 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.31
YBX3-211ENST00000541351 A0A0G2JND7 137 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 LOC107986453A0A1B0GWG9 222 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 DEFB4AO15263 64 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 MPPED1O15442 326 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 CCDC22O60826 627 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 RPP14O95059 124 aaKnown RBP6.89□□□□□ -1.31
YBX3-211ENST00000541351 MIFP14174 115 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 CPEP16870 476 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 ALKBH1Q13686 389 aaKnown RBP6.89□□□□□ -1.31
YBX3-211ENST00000541351 PSG5Q15238 335 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 RSU1Q15404 277 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 MORN2Q502X0 79 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 TMEM179BQ7Z7N9 219 aa6.89□□□□□ -1.31
YBX3-211ENST00000541351 ZNF554Q86TJ5 538 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms