RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ABHD14BQ96IU4 210 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 CLEC7AQ9BXN2 247 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 FXYD6Q9H0Q3 95 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 HEXA-AS1Q9H8Q6 139 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 OR2W1Q9Y3N9 320 aa7.6□□□□□ -1.19
DDX55-208ENST00000541259 CENPXA8MT69 81 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 CD5LO43866 347 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 RGS11O94810 467 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 LY6G6DO95868 133 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 PPYP01298 95 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 IGLV1-47P01700 117 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 OR8U9P0C7N5 309 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 IGHV4-38-2P0DP08 117 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 CD99P14209 185 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 SPNP16150 400 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 FAUP35544 74 aaKnown RBP7.59□□□□□ -1.19
DDX55-208ENST00000541259 TMEM30BQ3MIR4 351 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 KLF17Q5JT82 389 aaPredicted RBP7.59□□□□□ -1.19
DDX55-208ENST00000541259 LY6G6FQ5SQ64 297 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 LDLRAD2Q5SZI1 272 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 IDO2Q6ZQW0 420 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 SLC25A48Q6ZT89 311 aaKnown RBP7.59□□□□□ -1.19
DDX55-208ENST00000541259 LHFPL1Q86WI0 220 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 TMEM17Q86X19 198 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 ODF3L1Q8IXM7 274 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 ARRDC1Q8N5I2 433 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 POC5Q8NA72 575 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 OR2AK2Q8NG84 335 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 OR8U1Q8NH10 309 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 OR9G1Q8NH87 305 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 TERB2Q8NHR7 220 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 ZNF596Q8TC21 504 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 MARCH1Q8TCQ1 289 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 SECTM1Q8WVN6 248 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 C17orf50Q8WW18 174 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 TOMM40LQ969M1 308 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 UPRTQ96BW1 309 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 MOB3AQ96BX8 217 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 C5orf30Q96GV9 206 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 C7orf50Q9BRJ6 194 aaKnown RBP7.59□□□□□ -1.19
DDX55-208ENST00000541259 AGMATQ9BSE5 352 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 ABHD14AQ9BUJ0 271 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 RSRP1Q9BUV0 290 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 IFI27L2Q9H2X8 130 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 CCL28Q9NRJ3 127 aa7.59□□□□□ -1.19
DDX55-208ENST00000541259 SOX21Q9Y651 276 aaPredicted RBP7.59□□□□□ -1.19
DDX55-208ENST00000541259 F8P00451 2351 aa7.59□□□□□ -1.2
DDX55-208ENST00000541259 NAP1L6A6NFF2 107 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 ODF3BA8MYP8 253 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 J3QLI3 93 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 TOR1AO14656 332 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 HSD17B6O14756 317 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 PROP1O75360 226 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 IGLV2-14P01704 120 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 ARG1P05089 322 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 PI3P19957 117 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 PAX6P26367 422 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 LUMP51884 338 aaPredicted RBP7.58□□□□□ -1.2
DDX55-208ENST00000541259 UBE2E1P51965 193 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 HERV-K104P61576 105 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 BAMBIQ13145 260 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 DIAPH2-AS1Q14236 149 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 RUSC1-AS1Q66K80 236 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 NCR3LG1Q68D85 454 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 ZNF626Q68DY1 528 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 BRD3OSQ6XYD6 125 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 IL17RELQ6ZVW7 336 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 LYG1Q8N1E2 194 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 LINC00311Q8N616 119 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 OR11H6Q8NGC7 330 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 OR4P4Q8NGL7 312 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 DEDD2Q8WXF8 326 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 RBMXL1Q96E39 390 aaKnown RBP7.58□□□□□ -1.2
DDX55-208ENST00000541259 GPHA2Q96T91 129 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 PRRT1Q99946 306 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 SLC5A7Q9GZV3 580 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 MMP28Q9H239 520 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 PALMDQ9NP74 551 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 YAE1D1Q9NRH1 226 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 SLC2A8Q9NY64 477 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 SCP2D1Q9UJQ7 156 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 KCNS2Q9ULS6 477 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 VSIG4Q9Y279 399 aa7.58□□□□□ -1.2
DDX55-208ENST00000541259 RBM7Q9Y580 266 aaKnown RBP7.58□□□□□ -1.2
DDX55-208ENST00000541259 TRAV40A0A0B4J280 105 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 IGHV1-69DA0A0B4J2H0 117 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
DDX55-208ENST00000541259 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 ITGB1BP1O14713 200 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 IGHV1-69P01742 117 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 SLC6A1P30531 599 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 GNRHRP30968 328 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 PRRX1P54821 245 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 LINC00205P59089 165 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 DEFA1P59665 94 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 DEFA3P59666 94 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 HLA-DRB5Q30154 266 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 Q3ZCU0 254 aa7.57□□□□□ -1.2
DDX55-208ENST00000541259 PLA1AQ53H76 456 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms