RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
AP003559.1-201ENST00000540906 NKX6-3A6NJ46 265 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 K7EPK0 472 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 RAMP3O60896 148 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 RP2O75695 350 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 IGKV1-5P01602 117 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 DANCRP0C864 163 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 IGFBP2P18065 325 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 PPOXP50336 477 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 Q3ZCU0 254 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 PRAMEF5Q5TYX0 476 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 Q6ZRM9 215 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 C1orf87Q8N0U7 546 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 FAM71E2Q8N5Q1 922 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 NINJ1Q92982 152 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 NCOR1P1Q9H4R4 102 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 SDHAF2Q9NX18 166 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 OR6C3Q9NZP0 311 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 GNG12Q9UBI6 72 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 YLPM1P49750 1951 aaKnown RBP10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 USF3Q68DE3 2245 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 KBTBD11-OT1A0A1B0GTJ5 212 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 LINC00473A8K010 186 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 C17orf98A8MV24 154 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 NXPH3O95157 252 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 WNT2P09544 360 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 CCL3L1P16619 93 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 AGAP20933 346 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 HTR2BP41595 481 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 RPL39P5Q59GN2 51 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 RBPMSQ93062 196 aaKnown RBP10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 GPR146Q96CH1 333 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 IFI27L2Q9H2X8 130 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 CBLN4Q9NTU7 201 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 GFOD1Q9NXC2 390 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 CLN8Q9UBY8 286 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 JPT1Q9UK76 154 aa10.12□□□□□ -0.79
AP003559.1-201ENST00000540906 COL12A1Q99715 3063 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 TRGV10A0A0A0MS01 117 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 DVL1O14640 695 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 YPEL1O60688 119 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 DMBX1Q8NFW5 382 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 CORO2AQ92828 525 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 YPEL2Q96QA6 119 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 RCL1Q9Y2P8 373 aaKnown RBP10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 TMED3Q9Y3Q3 217 aa10.11□□□□□ -0.79
AP003559.1-201ENST00000540906 DEDDO75618 318 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 OR2F2O95006 317 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 EPHA1P21709 976 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 SRPXP78539 464 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 OR2F1Q13607 317 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF345Q14585 488 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 HFEQ30201 348 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 CXorf66Q5JRM2 361 aaPredicted RBP10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 TMEM200BQ69YZ2 307 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 CLEC9AQ6UXN8 241 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF439Q8NDP4 499 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 IDI2-AS1Q9NZ38 188 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 BCL2L11O43521 198 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 NDUFS7O75251 213 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 IGHV2-70P01814 119 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 HKR1P10072 659 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 NFYBP25208 207 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 LPAR6P43657 344 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 NCR3LG1Q68D85 454 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF767PQ75MW2 155 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 DTX2Q86UW9 622 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 ODF3L1Q8IXM7 274 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 IL22RA2Q969J5 263 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 CYTL1Q9NRR1 136 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 LAMP3Q9UQV4 416 aa10.1□□□□□ -0.79
AP003559.1-201ENST00000540906 A0A0D9SG52 128 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 CLEC18AA5D8T8 446 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF729A6NN14 1252 aaPredicted RBP10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 SPDEFO95238 335 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 RLN2P04090 185 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 SERPINE2P07093 398 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 VDAC1P21796 283 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 CDKN1AP38936 164 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 GNG10P50151 68 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 POLR2GP62487 172 aaKnown RBP eCLIP10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 RPL31P62899 125 aaKnown RBP10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 ALKAL2Q6UX46 152 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF841Q6ZN19 808 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 ZNF295-AS1Q8N0V1 137 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 CLEC18CQ8NCF0 446 aa10.09□□□□□ -0.79
AP003559.1-201ENST00000540906 TCTEX1D2Q8WW35 142 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms