RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ATF1P18846 271 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 CX3CL1P78423 397 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 NDPQ00604 133 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF45Q02386 682 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 CDK5R1Q15078 307 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 LRRC36Q1X8D7 754 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 MICAQ29983 383 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 ACTBL2Q562R1 376 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 RSBN1Q5VWQ0 802 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF322Q6U7Q0 402 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 UTS2BQ765I0 119 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 PPP1R27Q86WC6 154 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 IQCF1Q8N6M8 205 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 BBS1Q8NFJ9 593 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 MS4A10Q96PG2 267 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 FYTTD1Q96QD9 318 aaKnown RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 APOL4Q9BPW4 351 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 QTRT1Q9BXR0 403 aaKnown RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 WFDC10AQ9H1F0 79 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 EFCAB1Q9HAE3 211 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 PEMTQ9UBM1 199 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 RAB21Q9UL25 225 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 DHDHQ9UQ10 334 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 TRAV39A0A0B4J263 110 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CCDC182A6NF36 153 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CGB1A6NKQ9 187 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 H3BN98 237 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 C15orf65H3BRN8 121 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 HSPB6O14558 160 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 ORC5O43913 435 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 IFNA4P05014 189 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 MRPL3P09001 348 aaKnown RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 OCM2P0CE71 109 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 OCMP0CE72 109 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 DBTP11182 482 aaKnown RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 COX4I1P13073 169 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 AADACP22760 399 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 MAGEA2P43356 314 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 PSME3P61289 254 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 IL13RA2Q14627 380 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 GINS1Q14691 196 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 RPEL1Q2QD12 228 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 DEFB114Q30KQ6 69 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 TMEM30BQ3MIR4 351 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CT45A1Q5HYN5 189 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 UNQ5815/PRO19632Q6UWF5 114 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 PLEKHG7Q6ZR37 379 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 SLC16A13Q7RTY0 426 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 GVQW1Q8N7I0 195 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 POC5Q8NA72 575 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF439Q8NDP4 499 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CT45A3Q8NHU0 189 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CNIH3Q8TBE1 160 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 PLPPR1Q8TBJ4 325 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 NPIPB3Q92617 1050 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 ARL11Q969Q4 196 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 RFT1Q96AA3 541 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 RNF183Q96D59 192 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 ADAT3Q96EY9 351 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 OPALINQ96PE5 141 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 CNN2Q99439 309 aaKnown RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 TTTY10Q9BZA0 68 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 MFFQ9GZY8 342 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 NEK6Q9HC98 313 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 RAB9BQ9NP90 201 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 SPAG4Q9NPE6 437 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 ZC4H2Q9NQZ6 224 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 PEF1Q9UBV8 284 aaKnown RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 A3GALT2U3KPV4 340 aa3.42□□□□□ -1.86
SNHG1-214ENST00000540865 V9GYY5 206 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-214ENST00000540865 IGHV3-43A0A0B4J1X8 118 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 LOC107986453A0A1B0GWG9 222 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 TMEM30CPA0ZSE6 113 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF670-ZNF695F2Z2N8 137 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 UBE2CO00762 179 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 RRHO14718 337 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 RTL8CO15255 209 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 SLC31A2O15432 143 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 MAGEB4O15481 346 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 XRCC3O43542 346 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 MITFO75030 526 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 RPP14O95059 124 aaKnown RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 KRT8P05787 483 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 UBCP0CG48 685 aaKnown RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 IGHV3-43DP0DP04 118 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 KIR2DS2P43631 304 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ALDH3A2P51648 485 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 APOC4P55056 127 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 FAM3BP58499 235 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 CXCR4P61073 352 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 CDK5Q00535 292 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 PPP1R8Q12972 351 aaKnown RBP3.41□□□□□ -1.86
SNHG1-214ENST00000540865 GK3PQ14409 553 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 GUCA2BQ16661 112 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ODF4Q2M2E3 257 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ELP2Q6IA86 826 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF343Q6P1L6 599 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF562Q6V9R5 426 aa3.41□□□□□ -1.86
SNHG1-214ENST00000540865 SLC35F2Q8IXU6 374 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms