RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 H1FOOQ8IZA3 346 aaPredicted RBP12.48□□□□□ -0.41
DDB1-218ENST00000540784 OR5AP2Q8NGF4 316 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 CAPSLQ8WWF8 208 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 RTN4IP1Q8WWV3 396 aaPredicted RBP12.48□□□□□ -0.41
DDB1-218ENST00000540784 S1PR3Q99500 378 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 BATF3Q9NR55 127 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 NECAP2Q9NVZ3 263 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 ZNF221Q9UK13 617 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
DDB1-218ENST00000540784 RBM7Q9Y580 266 aaKnown RBP12.48□□□□□ -0.41
DDB1-218ENST00000540784 CUBNO60494 3623 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 TIMM23O14925 209 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 TXNL1O43396 289 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 LANCL1O43813 399 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 RBBP9O75884 186 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 CRYBA1P05813 215 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 FAM106CPP0CH98 169 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 NAT1P18440 290 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 IL18Q14116 193 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 LYSMD2Q8IV50 215 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 DRAM1Q8N682 238 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 TMEM158Q8WZ71 300 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 SNAPC3Q92966 411 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 AGMATQ9BSE5 352 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 PITPNC1Q9UKF7 332 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 ANAPC10Q9UM13 185 aa12.47□□□□□ -0.41
DDB1-218ENST00000540784 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 A0A1W2PPI3 338 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 FAM181BA6NEQ2 426 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 GPR137BO60478 399 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 SAA2P0DJI9 122 aaPredicted RBP12.46□□□□□ -0.41
DDB1-218ENST00000540784 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.41
DDB1-218ENST00000540784 CD24P25063 80 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 GPR12P47775 334 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 MRPS10P82664 201 aaKnown RBP12.46□□□□□ -0.41
DDB1-218ENST00000540784 CDK10Q15131 360 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 RNASE12Q5GAN4 147 aaKnown RBP12.46□□□□□ -0.41
DDB1-218ENST00000540784 ZNF833PQ6ZTB9 187 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 OR52I2Q8NH67 350 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 OR56B4Q8NH76 319 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 SOSTQ9BQB4 213 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 TCF19Q9Y242 345 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 OR2W1Q9Y3N9 320 aa12.46□□□□□ -0.41
DDB1-218ENST00000540784 A6NDX4 124 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 GABARAPH6UMI1 98 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 J3QRK9 145 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 PMP2P02689 132 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 HLA-DMAP28067 261 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 FCGR2CP31995 323 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 RCVRNP35243 200 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 LUMP51884 338 aaPredicted RBP12.45□□□□□ -0.42
DDB1-218ENST00000540784 TAS2R46P59540 309 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 FAM131AQ6UXB0 335 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 OR5H2Q8NGV7 314 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 RAB18Q9NP72 206 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 KLK11Q9UBX7 282 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 C2CD3Q4AC94 2353 aa12.45□□□□□ -0.42
DDB1-218ENST00000540784 FAM90A9PA6NNJ1 464 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 RNF212BA8MTL3 300 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 CTDSPLO15194 276 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
DDB1-218ENST00000540784 CD1BP29016 333 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 RFX2P48378 723 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 HES1Q14469 280 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 RPL39P5Q59GN2 51 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 FAM71F2Q6NXP2 309 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 CCBE1Q6UXH8 406 aaPredicted RBP12.44□□□□□ -0.42
DDB1-218ENST00000540784 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.44□□□□□ -0.42
DDB1-218ENST00000540784 OR6Q1Q8NGQ2 317 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 CFHR4Q92496 578 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 ZNF251Q9BRH9 671 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
DDB1-218ENST00000540784 IGHV3-72A0A0B4J1Y9 119 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 ZNF736B4DX44 427 aaPredicted RBP12.43□□□□□ -0.42
DDB1-218ENST00000540784 ACTBP60709 375 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 RPL15P61313 204 aaKnown RBP12.43□□□□□ -0.42
DDB1-218ENST00000540784 ACTG1P63261 375 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 DGCR2P98153 550 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
DDB1-218ENST00000540784 HNF4GQ14541 408 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 KRTAP21-3Q3LHN1 58 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 DHRS11Q6UWP2 260 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 TMEM219Q86XT9 240 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.43□□□□□ -0.42
DDB1-218ENST00000540784 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
DDB1-218ENST00000540784 MRPL20Q9BYC9 149 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms