RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 A0A1W2PN81 502 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 SOX15O60248 233 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 HTR2CP28335 458 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 CHRNA7P36544 502 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 CRIP2P52943 208 aaPredicted RBP10.94□□□□□ -0.66
SNHG1-213ENST00000540725 ACSM3Q53FZ2 586 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 RPL39P5Q59GN2 51 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 RBM48Q5RL73 367 aaKnown RBP10.94□□□□□ -0.66
SNHG1-213ENST00000540725 C1orf100Q5SVJ3 147 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 GLT8D1Q68CQ7 371 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
SNHG1-213ENST00000540725 LRRTM1Q86UE6 522 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 BPIFB6Q8NFQ5 453 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 FBLIM1Q8WUP2 373 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 NICN1Q9BSH3 213 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 KCNK15Q9H427 330 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 FBXL15Q9H469 300 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 CHMP1AQ9HD42 196 aaPredicted RBP10.94□□□□□ -0.66
SNHG1-213ENST00000540725 PIPOXQ9P0Z9 390 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 SLC23A1Q9UHI7 598 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 FOXA2Q9Y261 457 aaPredicted RBP10.94□□□□□ -0.66
SNHG1-213ENST00000540725 TNCP24821 2201 aa10.94□□□□□ -0.66
SNHG1-213ENST00000540725 RRHO14718 337 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 RAB29O14966 203 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 SAP30O75446 220 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 NAPSAO96009 420 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 SLURP1P55000 103 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 CX3CL1P78423 397 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 UNC119Q13432 240 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 PLGLAQ15195 96 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 ZNF880Q6PDB4 577 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 GLDNQ6ZMI3 551 aaPredicted RBP10.93□□□□□ -0.66
SNHG1-213ENST00000540725 MOB1BQ7L9L4 216 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 MS4A15Q8N5U1 240 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 KCNG3Q8TAE7 436 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 SETD6Q8TBK2 473 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 CASTOR1Q8WTX7 329 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 PHYHIPQ92561 330 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
SNHG1-213ENST00000540725 TM2D1Q9BX74 207 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 PARP12Q9H0J9 701 aaKnown RBP10.93□□□□□ -0.66
SNHG1-213ENST00000540725 FKBP14Q9NWM8 211 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 A3GALT2U3KPV4 340 aa10.93□□□□□ -0.66
SNHG1-213ENST00000540725 OR5H14A6NHG9 310 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 LINC01619G3V211 115 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 LGALS1P09382 135 aaKnown RBP10.92□□□□□ -0.66
SNHG1-213ENST00000540725 RCN1Q15293 331 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 TCTEX1D1Q8N7M0 179 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 ABHD5Q8WTS1 349 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 ABHD14BQ96IU4 210 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 TMED9Q9BVK6 235 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 NUBP2Q9Y5Y2 271 aa10.92□□□□□ -0.66
SNHG1-213ENST00000540725 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 A0A087WW49 117 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 A0A0A6YYD4 124 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 TMEM14DPA8MWL7 114 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 H0YJW9 148 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 H7C2Y5 167 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 FCN1O00602 326 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 SLC22A1O15245 554 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 GSTP1P09211 210 aaKnown RBP10.91□□□□□ -0.66
SNHG1-213ENST00000540725 EGR2P11161 476 aaPredicted RBP10.91□□□□□ -0.66
SNHG1-213ENST00000540725 SPNP16150 400 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 MC5RP33032 325 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 QRFPP83859 136 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 TMEM267Q0VDI3 215 aaPredicted RBP10.91□□□□□ -0.66
SNHG1-213ENST00000540725 CD200R1LQ6Q8B3 271 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 MND1Q9BWT6 205 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 TPSG1Q9NRR2 321 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 PLEKHJ1Q9NW61 149 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 GAB2Q9UQC2 676 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 WASHC3Q9Y3C0 194 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
SNHG1-213ENST00000540725 TRBV6-6A0A0A6YYG2 114 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 ITGB1BP1O14713 200 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 RBBP9O75884 186 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 BPNT1O95861 308 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 CDK1P06493 297 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 SRMP19623 302 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 HSD17B12Q53GQ0 312 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 PYHIN1Q6K0P9 492 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 ACSM6Q6P461 480 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 UNQ5815/PRO19632Q6UWF5 114 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 CEACAM19Q7Z692 300 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 PPP1R27Q86WC6 154 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 SBSPONQ8IVN8 264 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 OR5AN1Q8NGI8 311 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 OR6M1Q8NGM8 313 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 AGMATQ9BSE5 352 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 HDHD3Q9BSH5 251 aaPredicted RBP10.9□□□□□ -0.66
SNHG1-213ENST00000540725 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.66
SNHG1-213ENST00000540725 GHITMQ9H3K2 345 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
SNHG1-213ENST00000540725 OR1A1Q9P1Q5 309 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms