RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 J3QR06 171 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 PLA1AQ53H76 456 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 C1orf229Q6ZS94 237 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 C8orf31Q8N9H6 132 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 OR11H6Q8NGC7 330 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ZNF596Q8TC21 504 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 MARCH1Q8TCQ1 289 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 UPRTQ96BW1 309 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 ABHD14BQ96IU4 210 aa15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 RBM7Q9Y580 266 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-213ENST00000540022 FAM240BA0A1B0GVZ2 78 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 INAFM1C9JVW0 142 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGLV1-47P01700 117 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 BAMBIQ13145 260 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 NCR3LG1Q68D85 454 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LINC00311Q8N616 119 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SECTM1Q8WVN6 248 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CREB3L1Q96BA8 519 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SLC5A7Q9GZV3 580 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 OR2D2Q9H210 308 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 DPAGT1Q9H3H5 408 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 OCEL1Q9H607 264 aa15.39■□□□□ 0.05
TNFRSF1A-213ENST00000540022 TOR1AO14656 332 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CD5LO43866 347 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 NDUFB6O95139 128 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RAB7AP51149 207 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 UCP3P55916 312 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RBMS2Q15434 407 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 HLA-DRB5Q30154 266 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF626Q68DY1 528 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ODF3L1Q8IXM7 274 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ENKURQ8TC29 256 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SLC25A21Q9BQT8 299 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 MMP28Q9H239 520 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CCL28Q9NRJ3 127 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SVEP1Q4LDE5 3571 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CENPVL3A0A0U1RRI6 287 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 A0A1W2PRD5 423 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 A0A1W2PRF3 423 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 A0A1W2PRM7 423 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ODF3BA8MYP8 253 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGLV2-14P01704 120 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 TCRBP04435 133 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PGAM2P15259 253 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GNRHRP30968 328 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PRRX1P54821 245 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RGS21Q2M5E4 152 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LYG1Q8N1E2 194 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 BEND2Q8NDZ0 799 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 OR4P4Q8NGL7 312 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GPR132Q9UNW8 380 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 VSIG4Q9Y279 399 aa15.38■□□□□ 0.05
TNFRSF1A-213ENST00000540022 TRAV40A0A0B4J280 105 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PTTG1O95997 202 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ARG1P05089 322 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SPNP16150 400 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 UBE2E1P51965 193 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SURF2Q15527 256 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF818PQ6ZRF7 136 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 DUSP18Q8NEJ0 188 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 FAM216AQ8WUB2 273 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 KCNS2Q9ULS6 477 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 FLVCR2Q9UPI3 526 aa15.37■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGHV3OR16-10A0A075B7F0 116 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SAA2-SAA4A0A096LPE2 208 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 HSD17B6O14756 317 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PROP1O75360 226 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SAA2P0DJI9 122 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PI3P19957 117 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ECI1P42126 302 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 KLF17Q5JT82 389 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LDLRAD2Q5SZI1 272 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF645Q8N7E2 425 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 OR10X1Q8NGY0 326 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF251Q9BRH9 671 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RSRP1Q9BUV0 290 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 YAE1D1Q9NRH1 226 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZNF221Q9UK13 617 aa15.36■□□□□ 0.05
TNFRSF1A-213ENST00000540022 BUB1B-PAK6H3BSN5 160 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 IGHV4-38-2P0DP08 117 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GPR12P47775 334 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RPL39P5Q59GN2 51 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LPCAT3Q6P1A2 487 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SLC38A6Q8IZM9 456 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 DRAM1Q8N682 238 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZDHHC22Q8N966 263 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 C5orf66Q9H5L9 145 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 SDHAF2Q9NX18 166 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 PIPOXQ9P0Z9 390 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 COPZ2Q9P299 210 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CUBNO60494 3623 aa15.35■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RAB29O14966 203 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 CTSDP07339 412 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 DIAPH2-AS1Q14236 149 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 LHFPL4Q7Z7J7 247 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ZFAND1Q8TCF1 268 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 ST6GALNAC6Q969X2 333 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 GPHA2Q96T91 129 aa15.34■□□□□ 0.05
TNFRSF1A-213ENST00000540022 RTBDNQ9BSG5 229 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms