RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RPL30P62888 115 aaKnown RBP18.61■□□□□ 0.57
HOMER3-204ENST00000539827 MORN2Q502X0 79 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 ZNF585BQ52M93 769 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 SPIN2AQ99865 258 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 SPIN2BQ9BPZ2 258 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 TMEM204Q9BSN7 226 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 ZC4H2Q9NQZ6 224 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 LIN7CQ9NUP9 197 aaKnown RBP18.61■□□□□ 0.57
HOMER3-204ENST00000539827 JPT1Q9UK76 154 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 F2RL2O00254 374 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 ST8SIA3O43173 380 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 EPHA1P21709 976 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 TCF23Q7RTU1 214 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 SCARB1Q8WTV0 552 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 GPR146Q96CH1 333 aa18.6■□□□□ 0.57
HOMER3-204ENST00000539827 TRGV10A0A0A0MS01 117 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 RNF212BA8MTL3 300 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 LOXL3P58215 753 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 EIF4EBP1Q13541 118 aaPredicted RBP18.59■□□□□ 0.57
HOMER3-204ENST00000539827 POMT1Q9Y6A1 747 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 IGHV1-69-2A0A0G2JMI3 117 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 RPL12P30050 165 aaKnown RBP18.59■□□□□ 0.57
HOMER3-204ENST00000539827 IZUMO4Q1ZYL8 232 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 OR2B11Q5JQS5 317 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 UTF1Q5T230 341 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 LYPD2Q6UXB3 125 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 RNASE11Q8TAA1 199 aaKnown RBP18.59■□□□□ 0.57
HOMER3-204ENST00000539827 CYTL1Q9NRR1 136 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 SDHAF2Q9NX18 166 aa18.59■□□□□ 0.57
HOMER3-204ENST00000539827 ADGRG4Q8IZF6 3080 aa18.58■□□□□ 0.57
HOMER3-204ENST00000539827 E5RGE8 158 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 YPEL1O60688 119 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 NXPH3O95157 252 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 CLDN14O95500 239 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 LPAR6P43657 344 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 Q3ZCU0 254 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 CXorf66Q5JRM2 361 aaPredicted RBP18.58■□□□□ 0.56
HOMER3-204ENST00000539827 ITLN2Q8WWU7 325 aaPredicted RBP18.58■□□□□ 0.56
HOMER3-204ENST00000539827 LEAP2Q969E1 77 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 YPEL2Q96QA6 119 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 AGMATQ9BSE5 352 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 ZFP57Q9NU63 452 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 SLC25A10Q9UBX3 287 aaPredicted RBP18.58■□□□□ 0.56
HOMER3-204ENST00000539827 NSG2Q9Y328 171 aa18.58■□□□□ 0.56
HOMER3-204ENST00000539827 KBTBD11-OT1A0A1B0GTJ5 212 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 NKX2-1P43699 371 aaPredicted RBP18.57■□□□□ 0.56
HOMER3-204ENST00000539827 DMBX1Q8NFW5 382 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 EDARADDQ8WWZ3 215 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 CLN8Q9UBY8 286 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 DSCAML1Q8TD84 2053 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 TANC2Q9HCD6 1990 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 CLEC18AA5D8T8 446 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 LYNX1G3V0Z9 82 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 FCN3O75636 299 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 LYNX1P0DP58 116 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 POLR2GP62487 172 aaKnown RBP eCLIP18.57■□□□□ 0.56
HOMER3-204ENST00000539827 CLEC9AQ6UXN8 241 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 COMMD7Q86VX2 200 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 CLEC18CQ8NCF0 446 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 TCTEX1D2Q8WW35 142 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 MAGT1Q9H0U3 335 aa18.57■□□□□ 0.56
HOMER3-204ENST00000539827 B8ZZF3 427 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 TNFRSF13BO14836 293 aaPredicted RBP18.56■□□□□ 0.56
HOMER3-204ENST00000539827 IGKV1-5P01602 117 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 GPR12P47775 334 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 ZNF134P52741 427 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 LINC00205P59089 165 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 MSMO1Q15800 293 aa18.56■□□□□ 0.56
HOMER3-204ENST00000539827 C17orf98A8MV24 154 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 SLC31A2O15432 143 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 RAMP3O60896 148 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 CLDN1O95832 211 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 COL8A2P25067 703 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 ZNF816Q0VGE8 651 aaPredicted RBP18.55■□□□□ 0.56
HOMER3-204ENST00000539827 CCDC28AQ8IWP9 274 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 PLEKHA2Q9HB19 425 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 GFOD1Q9NXC2 390 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 A0A1W2PPE3 182 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 RRASP10301 218 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 NFYBP25208 207 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 AKR1C2P52895 323 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 CATR1Q13166 79 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 FAM74A1Q5RGS3 127 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 Q6ZRM9 215 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 CORO2AQ92828 525 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 BSCL2Q96G97 398 aaPredicted RBP18.55■□□□□ 0.56
HOMER3-204ENST00000539827 RAB9BQ9NP90 201 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 C19orf12Q9NSK7 152 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 IDI2-AS1Q9NZ38 188 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 RELNP78509 3460 aa18.55■□□□□ 0.56
HOMER3-204ENST00000539827 ZNF729A6NN14 1252 aaPredicted RBP18.54■□□□□ 0.56
HOMER3-204ENST00000539827 MMP23AO75900 390 aa18.54■□□□□ 0.56
HOMER3-204ENST00000539827 HFEQ30201 348 aa18.54■□□□□ 0.56
HOMER3-204ENST00000539827 TOR2AQ5JU69 321 aa18.54■□□□□ 0.56
HOMER3-204ENST00000539827 SMIM3Q9BZL3 60 aa18.54■□□□□ 0.56
HOMER3-204ENST00000539827 ANKHD1Q8IWZ3 2542 aaKnown RBP18.54■□□□□ 0.56
HOMER3-204ENST00000539827 HIVEP3Q5T1R4 2406 aa18.54■□□□□ 0.56
HOMER3-204ENST00000539827 hADV38S2A0JD32 116 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 LINC00473A8K010 186 aa18.53■□□□□ 0.56
HOMER3-204ENST00000539827 SSSCA1O60232 199 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms