RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PITPNC1Q9UKF7 332 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 HSF4Q9ULV5 492 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 PLA2G10O15496 165 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 SS18L1O75177 396 aaPredicted RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 MGPP08493 103 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 OR10J1P30954 320 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 MMDQ15546 238 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 WDR90Q96KV7 1748 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 RPL27AP46776 148 aaKnown RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 PPOXP50336 477 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 ZNF658BQ4V348 819 aaPredicted RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 FAM181AQ8N9Y4 354 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 SYT8Q8NBV8 401 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 KCNK17Q96T54 332 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 GPA33Q99795 319 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 MIOXQ9UGB7 285 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 CDC42EP3Q9UKI2 254 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 TNFSF18Q9UNG2 199 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 KCNK7Q9Y2U2 307 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 TRBV5-5A0A0J9YX44 114 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 WNT9BO14905 357 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 KLF7O75840 302 aaPredicted RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 IL11P20809 199 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 SLC35E4Q6ICL7 350 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 OR10J6PQ8NGY7 276 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 IDI2-AS1Q9NZ38 188 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 RCC2Q9P258 522 aaKnown RBP5.62□□□□□ -1.51
LSAMP-207ENST00000539563 A0A0G2JMZ2 1700 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 LRRC37A2A6NM11 1700 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 CBY3A6NI87 242 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 FTH1P19P0C7X4 201 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 ATP6V0CP27449 155 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 LDLRAD3Q86YD5 345 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 OR4A5Q8NH83 315 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 TXNDC17Q9BRA2 123 aa5.62□□□□□ -1.51
LSAMP-207ENST00000539563 H3BQ15 152 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 HIST1H1BP16401 226 aaKnown RBP5.61□□□□□ -1.51
LSAMP-207ENST00000539563 LRRC75BQ2VPJ9 315 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SPANXN1Q5VSR9 72 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 OR1K1Q8NGR3 316 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 HDHD3Q9BSH5 251 aaPredicted RBP5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SCNM1Q9BWG6 230 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 NPIPB13A6NJU9 1138 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 NPIPB4C9JG80 1138 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 FAM90A26D6RGX4 464 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 EFNB2P52799 333 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 WDFY1Q8IWB7 410 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 OR8G5Q8NG78 346 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 CHRNA10Q9GZZ6 450 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PXMP4Q9Y6I8 212 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 TRAV30A0A087WSZ9 112 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SNURFLB1AK76 121 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 MPV17P39210 176 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 DLX1P56177 255 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 ZNF79Q15937 498 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 HIST3H3Q16695 136 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 FAM222BQ8WU58 562 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 P2RX4Q99571 388 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PRDM14Q9GZV8 571 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 A8MWL6 223 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SIAH2O43255 324 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 NTN1O95631 604 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PRF1P14222 555 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 EBLN2Q6P2I7 272 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SCARF2Q96GP6 870 aaPredicted RBP5.61□□□□□ -1.51
LSAMP-207ENST00000539563 C16orf92Q96LL3 132 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PIMREGQ9BSJ6 248 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 RSRP1Q9BUV0 290 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PPP1R3EQ9H7J1 279 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 CENPVL1A0A0U1RR11 272 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 OR2H2O95918 312 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PTGDSP41222 190 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 LOXL3P58215 753 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 TWIST1Q15672 202 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 ECSCRQ19T08 205 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 POM121Q96HA1 1249 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 WNT5AP41221 380 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SLC25A45Q8N413 288 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 OR2D3Q8NGH3 330 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 SAP25Q8TEE9 199 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 TRAV20A0A0B4J274 112 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 C7orf66A4D0T2 115 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 C7orf77A4D0Y5 90 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 DLL1O00548 723 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 CDK2AP1O14519 115 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
LSAMP-207ENST00000539563 RELBQ01201 579 aa5.61□□□□□ -1.51
LSAMP-207ENST00000539563 COLQQ9Y215 455 aaPredicted RBP5.61□□□□□ -1.51
LSAMP-207ENST00000539563 IGKV3-7A0A075B6H7 116 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 GFRA1P56159 465 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 SFXN3Q9BWM7 321 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 MMD2Q8IY49 270 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 DYRK2Q92630 601 aa5.6□□□□□ -1.51
LSAMP-207ENST00000539563 OPN3Q9H1Y3 402 aaPredicted RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
LSAMP-207ENST00000539563 NAT2P11245 290 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms