RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 DEFB112Q30KQ8 113 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 SCGB2B2Q4G0G5 96 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 FBLN7Q53RD9 439 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 LDLRAD3Q86YD5 345 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 PRR18Q8N4B5 295 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF596Q8TC21 504 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 GIMAP1Q8WWP7 306 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 GINS4Q9BRT9 223 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 PRDM13Q9H4Q3 707 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 ESM1Q9NQ30 184 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 NUDT15Q9NV35 164 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 GFOD1Q9NXC2 390 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 PSG11Q9UQ72 335 aa10.53□□□□□ -0.72
CCDC42-202ENST00000539522 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 hCG_1809904A0A1W2PP81 198 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 A0A1W2PPE2 198 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 A0A1W2PR64 198 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 A0A1W2PRV1 198 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
CCDC42-202ENST00000539522 FABP7O15540 132 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 NFYBP25208 207 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 SRP14P37108 136 aaKnown RBP10.52□□□□□ -0.73
CCDC42-202ENST00000539522 ECI1P42126 302 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 SRSF2Q01130 221 aaKnown RBP10.52□□□□□ -0.73
CCDC42-202ENST00000539522 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 IGSF11Q5DX21 431 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 GPR157Q5UAW9 335 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 NCR3LG1Q68D85 454 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 ABHD12Q8N2K0 398 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 OR10V1Q8NGI7 309 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 OR4A4PQ8NGN8 299 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
CCDC42-202ENST00000539522 ALX4Q9H161 411 aaPredicted RBP10.52□□□□□ -0.73
CCDC42-202ENST00000539522 RAB9BQ9NP90 201 aa10.52□□□□□ -0.73
CCDC42-202ENST00000539522 hCG_2014768A0A024R1R8 64 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 SPINT2O43291 252 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 PRAF2O60831 178 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 PEX14O75381 377 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 DIRAS3O95661 229 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 HNF1AP20823 631 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 PPP1CCP36873 323 aaKnown RBP10.51□□□□□ -0.73
CCDC42-202ENST00000539522 BCAP31P51572 246 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
CCDC42-202ENST00000539522 HTD2P86397 168 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 MORN2Q502X0 79 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 CT45A1Q5HYN5 189 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 ODF3L1Q8IXM7 274 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 ZDHHC22Q8N966 263 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 OR52M1Q8NGK5 317 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 OR13C8Q8NGS7 320 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 CT45A3Q8NHU0 189 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 PIFOQ8TCI5 191 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 CABLES2Q9BTV7 478 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 CLEC7AQ9BXN2 247 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 C20orf85Q9H1P6 137 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 HEXA-AS1Q9H8Q6 139 aa10.51□□□□□ -0.73
CCDC42-202ENST00000539522 J3QR06 171 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
CCDC42-202ENST00000539522 RLN1P04808 185 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 ARG1P05089 322 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 IL5P05113 134 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 FCGR2CP31995 323 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 GNG10P50151 68 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 RAB25P57735 213 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 SURF2Q15527 256 aaPredicted RBP10.5□□□□□ -0.73
CCDC42-202ENST00000539522 HLA-DRB5Q30154 266 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 MIDNQ504T8 468 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 ZNF660Q6AZW8 331 aaPredicted RBP10.5□□□□□ -0.73
CCDC42-202ENST00000539522 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 SIGLECL1Q8N7X8 197 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 BEND2Q8NDZ0 799 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 ST6GALNAC6Q969X2 333 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 ZNF2Q9BSG1 426 aaPredicted RBP10.5□□□□□ -0.73
CCDC42-202ENST00000539522 TOLLIPQ9H0E2 274 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 FLVCR2Q9UPI3 526 aa10.5□□□□□ -0.73
CCDC42-202ENST00000539522 TRBV6-7A0A0A0MS04 114 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 PROP1O75360 226 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 VENTXO95231 258 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 UCP3P55916 312 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 BPIFB3P59826 476 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 LPCAT3Q6P1A2 487 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 Q6YL49 198 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 SLC25A48Q6ZT89 311 aaKnown RBP10.49□□□□□ -0.73
CCDC42-202ENST00000539522 CADM3Q8N126 398 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 LINC00311Q8N616 119 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 C8orf31Q8N9H6 132 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 OR9G1Q8NH87 305 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 OR10J5Q8NHC4 309 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 ZFAND1Q8TCF1 268 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 GALMQ96C23 342 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
CCDC42-202ENST00000539522 AGMATQ9BSE5 352 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms