RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ZNF295-AS1Q8N0V1 137 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 RCC1LQ96I51 464 aaKnown RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 STRADBQ9C0K7 418 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 OR1A1Q9P1Q5 309 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 RNF150Q9ULK6 438 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 PGPEP1LA6NFU8 196 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 CD300LBA8K4G0 201 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 RHBDL1O75783 438 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 TUSC2O75896 110 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 CDS2O95674 445 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 IL18BPO95998 194 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 BCL2P10415 239 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 TAS2R60P59551 318 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 ATP1A1-AS1Q5TC04 95 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 MRPL41Q8IXM3 137 aaKnown RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 APH1AQ96BI3 265 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 GNPNAT1Q96EK6 184 aaPredicted RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 C12orf49Q9H741 205 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 KCNS2Q9ULS6 477 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 TRAV24A0A0B4J272 114 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A10PA6NDY2 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A18PA6NE21 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A16PA6NEW6 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A20PA6NIJ5 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A22PA8MWA6 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A12PA8MX19 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A5PA8MXJ8 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 WDR1O75083 606 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A15PP0C7V4 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A13PP0C7W8 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A14PP0C7W9 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 FAM90A24PP0C7X0 464 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 ID3Q02535 119 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 SLC35E3Q7Z769 313 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 DEFB123Q8N688 67 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 MRPL30Q8TCC3 161 aaKnown RBP10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 OR5P3Q8WZ94 311 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 LHX4Q969G2 390 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 A0A087WWC5 75 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF737O75373 536 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SYNGR4O95473 234 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 IGKV1D-33P01593 117 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 IGKV1-33P01594 117 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 CD59P13987 128 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 VDAC1P21796 283 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 LINC00205P59089 165 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SPATA46Q5T0L3 261 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SAXO1Q8IYX7 474 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 OR10A7Q8NGE5 316 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 PSENENQ9NZ42 101 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SCGB1D1O95968 90 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 CRYAAP02489 173 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 COX5BP10606 129 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SFTPCP11686 197 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 SELEP16581 610 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 RNFT1Q5M7Z0 435 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 CST9LP1Q5W188 147 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 B4GALT7Q9UBV7 327 aa10.63□□□□□ -0.71
SFSWAP-208ENST00000539506 A6NNC1 897 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 TRAPPC2LH3BP13 241 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 CDX4O14627 284 aaPredicted RBP10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 UBE2G2P60604 165 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SSTP61278 116 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 NCR3LG1Q68D85 454 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR4C12Q96R67 309 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SPIN2AQ99865 258 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SPIN2BQ9BPZ2 258 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 MAP1LC3B2A6NCE7 125 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 ZNF883P0CG24 379 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 MEOX1P50221 254 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 PLGLB1Q02325 96 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 BATFQ16520 125 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SRSF7Q16629 238 aaKnown RBP eCLIP10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 HAPLN4Q86UW8 402 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR5A2Q8NGI9 324 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR4F5Q8NH21 305 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 MAP1LC3BQ9GZQ8 125 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 ICE1Q9Y2F5 2266 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 A0A1B0GW64 132 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 CA6P23280 308 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR10V1Q8NGI7 309 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 OR1P1Q8NH06 330 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 PLPPR2Q96GM1 343 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 DEFB127Q9H1M4 99 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 SIRT7Q9NRC8 400 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 DMXL1Q9Y485 3027 aa10.62□□□□□ -0.71
SFSWAP-208ENST00000539506 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms