RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RDH16O75452 317 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 STK16O75716 305 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 S1PR2O95136 353 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SOD1P00441 154 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 IGLV7-43P04211 117 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 KRT7P08729 469 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF806P0C7X5 589 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 RD3LP0DJH9 198 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SLC2A1P11166 492 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SLC2A5P22732 501 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PSMA1P25786 263 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HTR2CP28335 458 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CRYBA4P53673 196 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MTPNP58546 118 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 BTN3A2P78410 334 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SYCNQ0VAF6 134 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ECH1Q13011 328 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MOBPQ13875 183 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PSMD5Q16401 504 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 COX19Q49B96 90 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM78Q5T7P6 136 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CYB5R2Q6BCY4 276 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZFP2Q6ZN57 461 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 AHSA2Q719I0 299 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NEGR1Q7Z3B1 354 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 VN1R4Q7Z5H5 301 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LGI3Q8N145 548 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR6V1Q8N148 313 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LRRC18Q8N456 261 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LFNGQ8NES3 379 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR5B17Q8NGF7 314 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NELFBQ8WX92 580 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 GHSRQ92847 366 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ISOC2Q96AB3 205 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CHMP6Q96FZ7 201 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HSD17B10Q99714 261 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NAPGQ99747 312 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 UTP23Q9BRU9 249 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SLIRPQ9GZT3 109 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 VSIRQ9H7M9 311 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CHRAC1Q9NRG0 131 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CMTM6Q9NX76 183 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 UVRAGQ9P2Y5 699 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CARHSP1Q9Y2V2 147 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DIDO1Q9BTC0 2240 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LCTP09848 1927 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PARP4Q9UKK3 1724 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 IGSF9BQ9UPX0 1349 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OBSL1O75147 1896 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SPENQ96T58 3664 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NUP155O75694 1391 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CCNB3Q8WWL7 1395 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ROBO3Q96MS0 1386 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 A0A087WUJ7 227 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV3-43A0A0B4J1X8 118 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TRAV8-4A0A0B4J246 113 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 A0A1B0GU33 70 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR11H12B2RN74 326 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FTCDNL1E5RQL4 147 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 J3QRK9 145 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MANBAO00462 879 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NOS1APO75052 506 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 POP7O75817 140 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CCNE2O96020 404 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 P01737 135 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HMGN1P05114 100 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FABP1P07148 127 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LIMS3P0CW19 117 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LIMS4P0CW20 117 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LIPCP11150 499 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SSTR5P35346 364 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OPRK1P41145 380 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PPOXP50336 477 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 AQP5P55064 265 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CLDN12P56749 244 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 AP3S2P59780 193 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ARPC4P59998 168 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 BATFQ16520 125 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TAL2Q16559 108 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 THOC7Q6I9Y2 204 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SPOPLQ6IQ16 392 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 C16orf47Q6ZP98 133 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FAM92BQ6ZTR7 304 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 BLIDQ8IZY5 108 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SPAG16Q8N0X2 631 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM251Q8N6I4 163 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 LY6G5BQ8NDX9 201 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR11H1Q8NG94 326 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR51G1Q8NGK1 321 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR1P1Q8NH06 330 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR11H2Q8NH07 326 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR51E1Q8TCB6 317 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DYNC2LI1Q8TCX1 351 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DCAKDQ8WVC6 231 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 RXFP2Q8WXD0 754 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TAMM41Q96BW9 452 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MS4A6EQ96DS6 147 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 RMI2Q96E14 147 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 RTBDNQ9BSG5 229 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 THTPAQ9BU02 230 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms