RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 Q3ZCU0 254 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 C4orf46Q504U0 113 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 VMO1Q7Z5L0 202 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 LDLRAD3Q86YD5 345 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 CCDC71LQ8N9Z2 235 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 ADAD2Q8NCV1 583 aaKnown RBP11.57□□□□□ -0.56
CD4-208ENST00000538827 ABHD14BQ96IU4 210 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 MARVELD1Q9BSK0 173 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 TOLLIPQ9H0E2 274 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 GPR132Q9UNW8 380 aa11.57□□□□□ -0.56
CD4-208ENST00000538827 IGHV2-26A0A0B4J1V2 119 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 B4DSR2 109 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 GPR31O00270 319 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 TOR1AO14656 332 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
CD4-208ENST00000538827 TNFSF12O43508 249 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 VSIG10L2P0DP72 767 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
CD4-208ENST00000538827 VAMP1P23763 118 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 S100GP29377 79 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 RAB7AP51149 207 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 UCP3P55916 312 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 PIGPP57054 158 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 PAX2Q02962 417 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 DCAF12L2Q5VW00 463 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 LPCAT3Q6P1A2 487 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 Q6ZNX1 250 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 LYG1Q8N1E2 194 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 ABHD12Q8N2K0 398 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 PNKDQ8N490 385 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 Q8N7P7 452 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 LINC01356Q8N9X3 169 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 CAPSLQ8WWF8 208 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 SMR3AQ99954 134 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 SEC22CQ9BRL7 303 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 RSRP1Q9BUV0 290 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 CLEC7AQ9BXN2 247 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 SIRPDQ9H106 197 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 C5orf66Q9H5L9 145 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 METTL8Q9H825 291 aaKnown RBP11.56□□□□□ -0.56
CD4-208ENST00000538827 SLC2A9Q9NRM0 540 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 INSIG2Q9Y5U4 225 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 KPTNQ9Y664 436 aa11.56□□□□□ -0.56
CD4-208ENST00000538827 TEX13DA0A0J9YY54 714 aaPredicted RBP11.55□□□□□ -0.56
CD4-208ENST00000538827 A0A1W2PRD5 423 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 A0A1W2PRF3 423 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 A0A1W2PRM7 423 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 TOX4O94842 621 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 CBX3Q13185 183 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 CT45A1Q5HYN5 189 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 PDZD9Q8IXQ8 264 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 C11orf42Q8N5U0 333 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 DRAM1Q8N682 238 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 OR10X1Q8NGY0 326 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 OR9G1Q8NH87 305 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 CT45A3Q8NHU0 189 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 TMEM230Q96A57 120 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 ZNF486Q96H40 463 aaPredicted RBP11.55□□□□□ -0.56
CD4-208ENST00000538827 RTBDNQ9BSG5 229 aaPredicted RBP11.55□□□□□ -0.56
CD4-208ENST00000538827 POLR3KQ9Y2Y1 108 aaPredicted RBP11.55□□□□□ -0.56
CD4-208ENST00000538827 ALG5Q9Y673 324 aa11.55□□□□□ -0.56
CD4-208ENST00000538827 TRAV20A0A0B4J274 112 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 A0A0B4J293 547 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 J3QR06 171 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 ITGB1BP1O14713 200 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 PRAF2O60831 178 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 IL3RAP26951 378 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 GNRHRP30968 328 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 ZNF134P52741 427 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 SLC9A3R2Q15599 337 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 TMEM249Q2WGJ8 235 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 SLC25A48Q6ZT89 311 aaKnown RBP11.54□□□□□ -0.56
CD4-208ENST00000538827 SLC25A42Q86VD7 318 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 OR52B4Q8NGK2 314 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 CASTOR1Q8WTX7 329 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 C5orf30Q96GV9 206 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 GPHA2Q96T91 129 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
CD4-208ENST00000538827 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
CD4-208ENST00000538827 A0A087X0M5 115 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 A0A1B0GX30 115 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 M0R1X1 148 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 HLA-AP01891 365 aaKnown RBP11.53□□□□□ -0.56
CD4-208ENST00000538827 ARG1P05089 322 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 OR4E1P0C645 316 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms