RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 Q8N1Y9 231 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 GATSQ8NAP1 163 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 RPUSD4Q96CM3 377 aaKnown RBP5.7□□□□□ -1.5
USP28-207ENST00000538475 REEP6Q96HR9 211 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 THOC3Q96J01 351 aaKnown RBP5.7□□□□□ -1.5
USP28-207ENST00000538475 FAM71F1Q96KD3 344 aaPredicted RBP5.7□□□□□ -1.5
USP28-207ENST00000538475 ALKBH3Q96Q83 286 aaPredicted RBP5.7□□□□□ -1.5
USP28-207ENST00000538475 TXN2Q99757 166 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 HSPB9Q9BQS6 159 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 ZDHHC11Q9H8X9 412 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 FGF22Q9HCT0 170 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 GPR27Q9NS67 375 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 C1RLQ9NZP8 487 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 INSL6Q9Y581 213 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 B3GALT1Q9Y5Z6 326 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 ARL2-SNX15V9GYD0 113 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 PTPRSQ13332 1948 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 CEP192Q8TEP8 1941 aa5.7□□□□□ -1.5
USP28-207ENST00000538475 EP400Q96L91 3159 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 LOC105371242A0A075B767 164 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 MED19A0JLT2 244 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 NPIPB11E5RHQ5 1161 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 SLC33A1O00400 549 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 HYPMO75409 117 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TMEM50AO95807 157 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 ONECUT2O95948 504 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 CD55P08174 381 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 KITLGP21583 273 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 MDKP21741 143 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 F2RP25116 425 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 GJA4P35212 333 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 COMPP49747 757 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 LHX2P50458 406 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 FUT6P51993 359 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 BIDP55957 195 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 FBXW4P57775 412 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 FXYD4P59646 89 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 POU3F1Q03052 451 aaPredicted RBP5.69□□□□□ -1.5
USP28-207ENST00000538475 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 C10orf128Q5T292 105 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 DCAF12Q5T6F0 453 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 FAM78BQ5VT40 261 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 CST9LP1Q5W188 147 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TMEM42Q69YG0 159 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 RASL11AQ6T310 242 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 Q6ZN92 141 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 C1QL2Q7Z5L3 287 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 LINC00596Q86U02 117 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 RTN4RL2Q86UN3 420 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 BAGE3Q86Y29 109 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 BAGE2Q86Y30 109 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 OSR2Q8N2R0 312 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TMEM256Q8N2U0 113 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TMEM217Q8N7C4 229 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 STPG4Q8N801 248 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 OR4P4Q8NGL7 312 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 OR4F5Q8NH21 305 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 VN1R17PQ8TDU5 208 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 SPTSSAQ969W0 71 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 APH1AQ96BI3 265 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 STARD4Q96DR4 205 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 FOXN4Q96NZ1 517 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 OXGR1Q96P68 337 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 SPACA5Q96QH8 159 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 OR4F4Q96R69 305 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 ADOQ96SZ5 270 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TMEM147Q9BVK8 224 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 SAMD10Q9BYL1 202 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 ZNF160Q9HCG1 818 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 HRASLS2Q9NWW9 162 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 IL36BQ9NZH7 164 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 TAAR3PQ9P1P4 343 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 PAM16Q9Y3D7 125 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 ADAMTS20P59510 1910 aa5.69□□□□□ -1.5
USP28-207ENST00000538475 IGKV3D-11A0A0A0MRZ8 115 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 IGLV3-32A0A0A0MS00 114 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 IGLC7A0M8Q6 106 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR5B21A6NL26 309 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 SHISA7A6NL88 538 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 CD300LBA8K4G0 201 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 C9JCJ5 164 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 TRAF3IP2O43734 574 aaPredicted RBP5.68□□□□□ -1.5
USP28-207ENST00000538475 MPDU1O75352 247 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR2J2O76002 312 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 S1PR2O95136 353 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR10J4P0C629 311 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 NBEAP1P0C6P0 100 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 TSPOP30536 169 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 BMI1P35226 326 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 ASCL1P50553 236 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 CLDN18P56856 261 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OR1D5P58170 312 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 PLCXD2Q0VAA5 305 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 MMDQ15546 238 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 PSG3Q16557 428 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 VWC2Q2TAL6 325 aa5.68□□□□□ -1.5
USP28-207ENST00000538475 OCIAD2Q56VL3 154 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms