RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 SNIP1Q8TAD8 396 aaKnown RBP11.71□□□□□ -0.53
LIMK1-208ENST00000538333 GNPNAT1Q96EK6 184 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-208ENST00000538333 SFXN3Q9BWM7 321 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 GFRA3O60609 400 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 PPT1P50897 306 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.54
LIMK1-208ENST00000538333 PEA15Q15121 130 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 GCSAMQ8N6F7 178 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 FAM57AQ8TBR7 257 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 SEBOXQ9HB31 216 aaPredicted RBP11.71□□□□□ -0.54
LIMK1-208ENST00000538333 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 KPTNQ9Y664 436 aa11.71□□□□□ -0.54
LIMK1-208ENST00000538333 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 A0A1B0GW64 132 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 DFFBO76075 338 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 CRYAAP02489 173 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 KRTCAP3Q53RY4 240 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 ALKBH2Q6NS38 261 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 LFNGQ8NES3 379 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 NINJ1Q92982 152 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
LIMK1-208ENST00000538333 FAM90A26D6RGX4 464 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 IAPPP10997 89 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 NFYBP25208 207 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-208ENST00000538333 TAS2R30P59541 319 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 ARL16Q0P5N6 197 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 HFEQ30201 348 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 HAPLN4Q86UW8 402 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-208ENST00000538333 MUCL1Q96DR8 90 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 OR2V2Q96R30 315 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 AGMATQ9BSE5 352 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 HIPK2Q9H2X6 1198 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 SPTBN2O15020 2390 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 HTD2P86397 168 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 TRAT1Q6PIZ9 186 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 RFESDQ8TAC1 157 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 EIF5A2Q9GZV4 153 aaKnown RBP11.69□□□□□ -0.54
LIMK1-208ENST00000538333 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 DSCAMO60469 2012 aa11.69□□□□□ -0.54
LIMK1-208ENST00000538333 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 C17orf98A8MV24 154 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 A8MXE2 369 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 GPR37O15354 613 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 LHBP01229 141 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 CCL20P78556 96 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 CATR1Q13166 79 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 CR1LQ2VPA4 569 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 NDRG3Q9UGV2 375 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 PIEZO1Q92508 2521 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
LIMK1-208ENST00000538333 ATP6V1G2-DDX39BF2Z307 99 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 S1PR2O95136 353 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 ADH4P08319 380 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 G6PCP35575 357 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 FAM27E3Q08E93 113 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 ZNF525Q8N782 197 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 SNX22Q96L94 193 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 HSPB7Q9UBY9 170 aa11.68□□□□□ -0.54
LIMK1-208ENST00000538333 DSCAML1Q8TD84 2053 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 A0A1B0GV50 99 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 ODAMA1E959 279 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 SPINT2O43291 252 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 KRASP01116 189 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 UBE2KP61086 200 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 TNFRSF9Q07011 255 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
LIMK1-208ENST00000538333 VHLLQ6RSH7 139 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 BTNL3Q6UXE8 466 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 MOGAT3Q86VF5 341 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 FBXO7Q9Y3I1 522 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 IGHV3OR15-7A0A075B7D8 119 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 BTBD17A6NE02 478 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 LINC00473A8K010 186 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 DEFB108AA8MXU0 73 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 MGST3O14880 152 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 CLDN1O95832 211 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 IFNA5P01569 189 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 CCKARP32238 428 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 GATA4P43694 442 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 DPPA3Q6W0C5 159 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
LIMK1-208ENST00000538333 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms