RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HLA-GP17693 338 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 KLK2P20151 261 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 SURF2Q15527 256 aaPredicted RBP4.59□□□□□ -1.68
LRP6-203ENST00000538239 GUK1Q16774 197 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 RPEL1Q2QD12 228 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 KHDC3LQ587J8 217 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 C5orf17Q8NAS9 161 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 ZNF738Q8NE65 137 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 STXBP6Q8NFX7 210 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 TMEM167BQ9NRX6 74 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 RCC2Q9P258 522 aaKnown RBP4.59□□□□□ -1.68
LRP6-203ENST00000538239 IGKV3D-15A0A087WSY6 115 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 NEURL1O76050 574 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 IGKV3-15P01624 115 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 THY1P04216 161 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 AMTP48728 403 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 PPOXP50336 477 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 TEPPQ6URK8 271 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 PRNTQ86SH4 94 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 VKORC1L1Q8N0U8 176 aa4.59□□□□□ -1.68
LRP6-203ENST00000538239 CCDC88CQ9P219 2028 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TMSB15BA0A087X1C1 80 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 LOC102723971A0A1B0GUV8 181 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 RNASEK-C17orf49H0YIS7 233 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 SSTR5P35346 364 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ZNF273Q14593 569 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 OR9G1Q8NH87 305 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TMEM204Q9BSN7 226 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 G6PC2Q9NQR9 355 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TICRRQ7Z2Z1 1910 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 A0A1B0GU03 582 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 RCC1P18754 421 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 SLC6A1P30531 599 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 UBE2V2Q15819 145 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 C10orf128Q5T292 105 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 RNASEKQ6P5S7 137 aaKnown RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 FLVCR1-AS1Q8TAF5 88 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 FAM216AQ8WUB2 273 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 MIXL1Q9H2W2 232 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 CBLN4Q9NTU7 201 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TRAPPC1Q9Y5R8 145 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 IGKV1D-43A0A0B4J1Z2 117 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 LYNX1G3V0Z9 82 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TRIM77I1YAP6 450 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 PPP1R2P9O14990 202 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 LYNX1P0DP58 116 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 RPL8P62917 257 aaKnown RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 IL22RA2Q969J5 263 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 COL25A1Q9BXS0 654 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 WSB1Q9Y6I7 421 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 C19orf67A6NJJ6 358 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 EFEMP2O95967 443 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ADRB1P08588 477 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 B2MP61769 119 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 IRF3Q14653 427 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 CALHM1Q8IU99 346 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ZCCHC24Q8N2G6 241 aaKnown RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 ZNF837Q96EG3 531 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 SCMH1Q96GD3 660 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 GP6Q9HCN6 339 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 KCNK7Q9Y2U2 307 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 DOCK6Q96HP0 2047 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 E9PLN8 166 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 PLAUP00749 431 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ISG15P05161 165 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 FSTP19883 344 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 CAMPP49913 170 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 EWSR1Q01844 656 aaKnown RBP eCLIP4.58□□□□□ -1.68
LRP6-203ENST00000538239 KLF9Q13886 244 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 FXYD3Q14802 87 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 FAM106AQ4KMX7 169 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 FAM209AQ5JX71 171 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 LAMTOR1Q6IAA8 161 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 DGAT2L7PQ6IED9 249 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 C1orf162Q8NEQ5 155 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 VKORC1Q9BQB6 163 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TCEAL7Q9BRU2 100 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 TUBA4BQ9H853 241 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 ZNF729A6NN14 1252 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 CDRT15L2A8MXV6 281 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 SS18L1O75177 396 aaPredicted RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 RHBDL1O75783 438 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 RAB5AP20339 215 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 FAM216BQ8N7L0 139 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 OR4B1Q8NGF8 309 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 OR10J6PQ8NGY7 276 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 LPAR5Q9H1C0 372 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 MRPS18AQ9NVS2 196 aaKnown RBP4.58□□□□□ -1.68
LRP6-203ENST00000538239 V9GYH0 126 aa4.58□□□□□ -1.68
LRP6-203ENST00000538239 IGLV3-12A0A075B6K2 115 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 LOC102723996A0A087X1L8 192 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 A0A1W2PS18 150 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 KLF7O75840 302 aaPredicted RBP4.57□□□□□ -1.68
LRP6-203ENST00000538239 CPN1P15169 458 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 PMCHP20382 165 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 FOXF2Q12947 444 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 ACP7Q6ZNF0 438 aa4.57□□□□□ -1.68
LRP6-203ENST00000538239 OR2T10Q8NGZ9 312 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms