RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 UPRTQ96BW1 309 aa5.97□□□□□ -1.45
MSH6-209ENST00000538136 FLYWCH2Q96CP2 140 aaKnown RBP5.97□□□□□ -1.45
MSH6-209ENST00000538136 GAFA1Q96PS6 74 aa5.97□□□□□ -1.45
MSH6-209ENST00000538136 MRPL20Q9BYC9 149 aaKnown RBP5.97□□□□□ -1.45
MSH6-209ENST00000538136 C11orf54Q9H0W9 315 aaPredicted RBP5.97□□□□□ -1.45
MSH6-209ENST00000538136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.97□□□□□ -1.45
MSH6-209ENST00000538136 JKAMPQ9P055 326 aa5.97□□□□□ -1.45
MSH6-209ENST00000538136 ANXA10Q9UJ72 324 aa5.97□□□□□ -1.45
MSH6-209ENST00000538136 LSM2Q9Y333 95 aaKnown RBP5.97□□□□□ -1.45
MSH6-209ENST00000538136 LEUTXA8MZ59 168 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 ORC5O43913 435 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 TAS2R46P59540 309 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 SEZ6L2Q6UXD5 910 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 CROCCP3Q8IVE0 287 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 ZNF561Q8N587 486 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 YIPF6Q96EC8 236 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 RHOVQ96L33 236 aa5.96□□□□□ -1.45
MSH6-209ENST00000538136 DSCAML1Q8TD84 2053 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 IGHV3-66A0A0C4DH42 116 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 TRBV5-5A0A0J9YX44 114 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 RBP4P02753 201 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 ISG15P05161 165 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 SNRNP70P08621 437 aaKnown RBP5.96□□□□□ -1.46
MSH6-209ENST00000538136 FCGR3AP08637 254 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 H2AFB2P0C5Z0 115 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 FAM106CPP0CH98 169 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 OR13C7P0DN81 318 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 PPOXP50336 477 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 ASPHD2Q6ICH7 369 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 C1QL4Q86Z23 238 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 OR9G1Q8NH87 305 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 PKIBQ9C010 78 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 IDI2-AS1Q9NZ38 188 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 TRDCB7Z8K6 153 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 SLC22A5O76082 557 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 GAPDHP04406 335 aaKnown RBP5.96□□□□□ -1.46
MSH6-209ENST00000538136 ACAA1P09110 424 aaPredicted RBP5.96□□□□□ -1.46
MSH6-209ENST00000538136 CD200P41217 278 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 CCBE1Q6UXH8 406 aaPredicted RBP5.96□□□□□ -1.46
MSH6-209ENST00000538136 SLC35G3Q8N808 338 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 S100ZQ8WXG8 99 aa5.96□□□□□ -1.46
MSH6-209ENST00000538136 GOSR2O14653 212 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 XRCC3O43542 346 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 PPYP01298 95 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 PRB2P02812 416 aaPredicted RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 MYOD1P15172 320 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 CD34P28906 385 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 EFNB1P98172 346 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 SWI5Q1ZZU3 235 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 MPV17LQ2QL34 196 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 UTF1Q5T230 341 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 SLC16A12Q6ZSM3 486 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 ACOT7LQ6ZUV0 252 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 C14orf79Q96F83 325 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 Q96M66 194 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 WDR12Q9GZL7 423 aaKnown RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 DOK5Q9P104 306 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 MGAT4CQ9UBM8 478 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 SPENQ96T58 3664 aaKnown RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 TRAV1-2A0A0B4J238 106 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 J3KRW8 73 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 EVX1P49640 407 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 HLA-DRB3P79483 266 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 GUCA2BQ16661 112 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 Q56UQ5 140 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 CCDC71LQ8N9Z2 235 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 PHYHIPQ92561 330 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 COQ2Q96H96 371 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 GPN1Q9HCN4 374 aaPredicted RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 ATPIF1Q9UII2 106 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 RBMX2Q9Y388 322 aaKnown RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 KMT2BQ9UMN6 2715 aaPredicted RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 ADAP1O75689 374 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 AVPP01185 164 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 BLCAPP62952 87 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 AKR1C1Q04828 323 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 IRF3Q14653 427 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 ERGIC1Q969X5 290 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 MOB3AQ96BX8 217 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 TMEM133Q9H2Q1 129 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 MRPS18AQ9NVS2 196 aaKnown RBP5.95□□□□□ -1.46
MSH6-209ENST00000538136 GHRLQ9UBU3 117 aa5.95□□□□□ -1.46
MSH6-209ENST00000538136 KBTBD11-OT1A0A1B0GTJ5 212 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 NPFFO15130 113 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 IGHV2-5P01817 119 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 LOXP28300 417 aaPredicted RBP5.94□□□□□ -1.46
MSH6-209ENST00000538136 CHATP28329 748 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 ALDH3B2P48448 385 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 DSCR9P59020 149 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 PJVKQ0ZLH3 352 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 IAH1Q2TAA2 248 aaPredicted RBP5.94□□□□□ -1.46
MSH6-209ENST00000538136 NCR3LG1Q68D85 454 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 ZNF788Q6ZQV5 615 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 LILRB2Q8N423 598 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 PXT1Q8NFP0 134 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 P2RX4Q99571 388 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 SLC25A33Q9BSK2 321 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 IGHV2-26A0A0B4J1V2 119 aa5.94□□□□□ -1.46
MSH6-209ENST00000538136 KCNAB3O43448 404 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms