RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 KCTD7Q96MP8 289 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 CMSS1Q9BQ75 279 aaKnown RBP6.63□□□□□ -1.35
SPARC-208ENST00000538026 HSPB9Q9BQS6 159 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 TOLLIPQ9H0E2 274 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 RIMS4Q9H426 269 aaPredicted RBP6.63□□□□□ -1.35
SPARC-208ENST00000538026 CHMP1AQ9HD42 196 aaPredicted RBP6.63□□□□□ -1.35
SPARC-208ENST00000538026 C12orf4Q9NQ89 552 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.63□□□□□ -1.35
SPARC-208ENST00000538026 SLC23A1Q9UHI7 598 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 RNF150Q9ULK6 438 aa6.63□□□□□ -1.35
SPARC-208ENST00000538026 A0A075B6Q4 140 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 A0A087WXM4 84 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 M0QZ24 198 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 FGF16O43320 207 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 FBXO24O75426 580 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 MOSP00540 346 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 LSM3P62310 102 aaKnown RBP6.62□□□□□ -1.35
SPARC-208ENST00000538026 ZNF260Q3ZCT1 412 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 CDNFQ49AH0 187 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 GLDNQ6ZMI3 551 aaPredicted RBP6.62□□□□□ -1.35
SPARC-208ENST00000538026 C18orf65Q6ZTR6 163 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 MOB1BQ7L9L4 216 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 ZNF329Q86UD4 541 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 OR2T10Q8NGZ9 312 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 S1PR3Q99500 378 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 CABLES2Q9BTV7 478 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 ATG5Q9H1Y0 275 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 ABCG5Q9H222 651 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 MMP27Q9H306 513 aa6.62□□□□□ -1.35
SPARC-208ENST00000538026 ZNF107Q9UII5 783 aaPredicted RBP6.62□□□□□ -1.35
SPARC-208ENST00000538026 TRBV6-7A0A0A0MS04 114 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 TMEM235A6NFC5 223 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 M0QZK8 103 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 FABP7O15540 132 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 WIPF1O43516 503 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 TNFAIP8O95379 198 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 CSF1P09603 554 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 PTHLHP12272 177 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 IL3RAP26951 378 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 GPR12P47775 334 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 NCS1P62166 190 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 CFHR3Q02985 330 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 SRSF7Q16629 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPARC-208ENST00000538026 NSUN5P1Q3KNT7 163 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 C9orf152Q5JTZ5 239 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 HACD4Q5VWC8 232 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 Q6ZS49 121 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 CENPVQ7Z7K6 275 aaPredicted RBP6.61□□□□□ -1.35
SPARC-208ENST00000538026 OR2AK2Q8NG84 335 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 NUDCD2Q8WVJ2 157 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 AKR1E2Q96JD6 320 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
SPARC-208ENST00000538026 RAB9BQ9NP90 201 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 RHBDL2Q9NX52 303 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 RDH8Q9NYR8 311 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 ABRACLQ9P1F3 81 aa6.61□□□□□ -1.35
SPARC-208ENST00000538026 NCBP2LA6PVI3 153 aaKnown RBP6.6□□□□□ -1.35
SPARC-208ENST00000538026 SERPINE3A8MV23 424 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 H0YJW9 148 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 FCN1O00602 326 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 RAB29O14966 203 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 TXNL1O43396 289 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 AIREO43918 545 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 IGLV2-14P01704 120 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 OPN1MWP04001 364 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 OPN1MW2P0DN77 364 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 OPN1MW3P0DN78 364 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 ZBTB25P24278 435 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 ACTBP60709 375 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 SSBP2P81877 361 aaPredicted RBP6.6□□□□□ -1.35
SPARC-208ENST00000538026 NDPQ00604 133 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 KIAA0141Q14154 515 aaPredicted RBP6.6□□□□□ -1.35
SPARC-208ENST00000538026 MRGPRG-AS1Q2M3A8 158 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 C2orf68Q2NKX9 166 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 IDNKQ5T6J7 187 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 FAM71F2Q6NXP2 309 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 FAM131AQ6UXB0 335 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 ETV3LQ6ZN32 361 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 NDUFA11Q86Y39 141 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 DRAXINQ8NBI3 349 aaPredicted RBP6.6□□□□□ -1.35
SPARC-208ENST00000538026 NPBQ8NG41 125 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 OR4A4PQ8NGN8 299 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 OR13F1Q8NGS4 319 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 FUNDC2Q9BWH2 189 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 FBXO7Q9Y3I1 522 aa6.6□□□□□ -1.35
SPARC-208ENST00000538026 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 A0A1W2PRX2 142 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 METTL21EPA6NDL7 271 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 G3V4G9 280 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 BET1O15155 118 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 RGS11O94810 467 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 NDUFA3O95167 84 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 IGKV1-16P04430 117 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 TFAP2AP05549 437 aa6.59□□□□□ -1.35
SPARC-208ENST00000538026 OR8U9P0C7N5 309 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms