RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SIGLECL1Q8N7X8 197 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 SSC4DQ8WTU2 575 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 TMEM234Q8WY98 164 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 IRF7Q92985 503 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 PIMREGQ9BSJ6 248 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 IGHV1-69-2A0A0G2JMI3 117 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 ZNF816-ZNF321PA0A0X1KG74 233 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 OR6C6A6NF89 314 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 SLC17A3O00476 420 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 PAGE4O60829 102 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 NAPSAO96009 420 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
RTN3-208ENST00000537981 AMTP48728 403 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 RPS16P62249 146 aaKnown RBP9.11□□□□□ -0.95
RTN3-208ENST00000537981 PRTGQ2VWP7 1150 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.11□□□□□ -0.95
RTN3-208ENST00000537981 NIT1Q86X76 327 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 ZDHHC23Q8IYP9 409 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 SELENOHQ8IZQ5 122 aaKnown RBP9.11□□□□□ -0.95
RTN3-208ENST00000537981 CA13Q8N1Q1 262 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 C11orf40Q8WZ69 217 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 TM4SF19Q96DZ7 209 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 TXNIPQ9H3M7 391 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 GP6Q9HCN6 339 aa9.11□□□□□ -0.95
RTN3-208ENST00000537981 KIAA1324LA8MWY0 1029 aaPredicted RBP9.1□□□□□ -0.95
RTN3-208ENST00000537981 SPRY1O43609 319 aaPredicted RBP9.1□□□□□ -0.95
RTN3-208ENST00000537981 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
RTN3-208ENST00000537981 TIAF1O95411 115 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ESDP10768 282 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ZNF121P58317 390 aaPredicted RBP9.1□□□□□ -0.95
RTN3-208ENST00000537981 LCN2P80188 198 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 DEFB110Q30KQ9 67 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ACSM6Q6P461 480 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.1□□□□□ -0.959e-7■■■■□ 25.5
RTN3-208ENST00000537981 LINC00696Q6ZRV3 163 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 SPATA12Q7Z6I5 190 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 TBC1D26Q86UD7 250 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 OR52L2PQ8NGH6 319 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 OR10G6Q8NH81 332 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 NUDT22Q9BRQ3 303 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 IL23AQ9NPF7 189 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 COL4A2P08572 1712 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MUC3AQ02505 3323 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 C2orf16Q68DN1 1984 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MUC21A0A0G2JKD1 596 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MUC21A0A140T8X8 626 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 SERPINE3A8MV23 424 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 H0YGG7 62 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MLNRO43193 412 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 NUDT14O95848 222 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 CRYGCP07315 174 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 APOBEC3AP31941 199 aaPredicted RBP9.1□□□□□ -0.95
RTN3-208ENST00000537981 DEFB103AP81534 67 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ID3Q02535 119 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MFAP5Q13361 173 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 PRR31Q5SQ13 230 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ZNF695Q8IW36 515 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 TDHQ8IZJ6 230 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 NT5CQ8TCD5 201 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 ZNF721Q8TF20 911 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 SMIM12Q96EX1 92 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 TMEM222Q9H0R3 208 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 TMEM140Q9NV12 185 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 NECAP2Q9NVZ3 263 aa9.1□□□□□ -0.95
RTN3-208ENST00000537981 H0Y8G0 127 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 MPPED1O15442 326 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 ACTL6BO94805 426 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 FCGR2AP12318 317 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 IGLL1P15814 213 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 IER3P46695 156 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 RPS15AP62244 130 aaKnown RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 PSG9Q00887 426 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 DLX2Q07687 328 aaPredicted RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 HLA-DRB5Q30154 266 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 SFTPA2Q8IWL1 248 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 UBE2J1Q9Y385 318 aaPredicted RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 PTRH2Q9Y3E5 179 aaKnown RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 A0A1W2PS18 150 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 DPRXA6NFQ7 191 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 RER1O15258 196 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 IFNA5P01569 189 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 CTSEP14091 401 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 HNRNPA2B1P22626 353 aaKnown RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 GNRHRP30968 328 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 ATP5G3P48201 142 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 FUT6P51993 359 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 YPEL3P61236 119 aaPredicted RBP9.09□□□□□ -0.95
RTN3-208ENST00000537981 PPP1CAP62136 330 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 GNB1P62873 340 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 SLC35B1P78383 322 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 SRPXP78539 464 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 Q6ZRM9 215 aa9.09□□□□□ -0.95
RTN3-208ENST00000537981 BHLHA15Q7RTS1 189 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms