RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 A0A0A6YYD4 124 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 A0A1W2PN81 502 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 RRHO14718 337 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 OVOL1O14753 267 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 NAPSAO96009 420 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 UBBP0CG47 229 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 CD37P11049 281 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 SNRPBP14678 240 aaKnown RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 MAPK3P27361 379 aaPredicted RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 CHRNA7P36544 502 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 SLURP1P55000 103 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 QRFPP83859 136 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 GABPB1Q06547 395 aaPredicted RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 UNC119Q13432 240 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ECSCRQ19T08 205 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 GLT8D1Q68CQ7 371 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ZNF660Q6AZW8 331 aaPredicted RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 ZNF880Q6PDB4 577 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 FAM131AQ6UXB0 335 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 SBSPONQ8IVN8 264 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 C8orf59Q8N0T1 100 aaPredicted RBP6.54□□□□□ -1.36
USP28-203ENST00000537490 SVOPQ8N4V2 548 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 OR2AK2Q8NG84 335 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ABHD14BQ96IU4 210 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 TMED9Q9BVK6 235 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 TMEM59Q9BXS4 323 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 TOLLIPQ9H0E2 274 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ISYNA1Q9NPH2 558 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 C8orf4Q9NR00 106 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 FKBP14Q9NWM8 211 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 PIPOXQ9P0Z9 390 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ABRACLQ9P1F3 81 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 KIAA1456Q9P272 454 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 STEAP1Q9UHE8 339 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 GAB2Q9UQC2 676 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 ERGIC3Q9Y282 383 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 NUBP2Q9Y5Y2 271 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
USP28-203ENST00000537490 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 A0A087WW49 117 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 TMEM14DPA8MWL7 114 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 LINC01619G3V211 115 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 H0YJW9 148 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 RAB29O14966 203 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SLC22A1O15245 554 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SOCS1O15524 211 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 PROP1O75360 226 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SAP30O75446 220 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 CDK1P06493 297 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SPNP16150 400 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SRMP19623 302 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 LINC00205P59089 165 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 RCN1Q15293 331 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 RBM48Q5RL73 367 aaKnown RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 FAM71F2Q6NXP2 309 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 OVCH2Q7RTZ1 564 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 CEACAM19Q7Z692 300 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 ZNF429Q86V71 674 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 MS4A15Q8N5U1 240 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 KCNG3Q8TAE7 436 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 PHYHIPQ92561 330 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 THRSPQ92748 146 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 CLCC1Q96S66 551 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 AGMATQ9BSE5 352 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 HDHD3Q9BSH5 251 aaPredicted RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 FAM103A1Q9BTL3 118 aaKnown RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 C11orf54Q9H0W9 315 aaPredicted RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 LPAR5Q9H1C0 372 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 CHMP1AQ9HD42 196 aaPredicted RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 PLEKHJ1Q9NW61 149 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 OR1A1Q9P1Q5 309 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 FOXA2Q9Y261 457 aaPredicted RBP6.53□□□□□ -1.36
USP28-203ENST00000537490 A3GALT2U3KPV4 340 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
USP28-203ENST00000537490 TRBV6-6A0A0A6YYG2 114 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 OR5H14A6NHG9 310 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 C3orf84H3BNL1 204 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 H7C2Y5 167 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 ITGB1BP1O14713 200 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 IGHV3-11P01762 117 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
USP28-203ENST00000537490 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
USP28-203ENST00000537490 SCTP09683 121 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 MC5RP33032 325 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 CEACAM6P40199 344 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 TMEM50BP56557 158 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 PLGLAQ15195 96 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 PSG5Q15238 335 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 HSD17B12Q53GQ0 312 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 OGFRL1Q5TC84 451 aaPredicted RBP6.52□□□□□ -1.37
USP28-203ENST00000537490 RNLSQ5VYX0 342 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 ACSM6Q6P461 480 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 CD200R1LQ6Q8B3 271 aa6.52□□□□□ -1.37
USP28-203ENST00000537490 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms