RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 LINC01559Q495D7 138 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 FAM27D1Q5T7N8 215 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 OR10K2Q6IF99 312 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 LIN54Q6MZP7 749 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 TCTEX1D1Q8N7M0 179 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 NPBQ8NG41 125 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 SETD6Q8TBK2 473 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 EDARADDQ8WWZ3 215 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 ANKRD60Q9BZ19 345 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 PLGRKTQ9HBL7 147 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 DNAH9Q9NYC9 4486 aa10.25□□□□□ -0.77
RTN3-207ENST00000536011 TMEM14DPA8MWL7 114 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 HSPA12AO43301 675 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 RBBP9O75884 186 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 NDUFA3O95167 84 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 ARSBP15848 533 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 PPIFP30405 207 aaKnown RBP10.24□□□□□ -0.77
RTN3-207ENST00000536011 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 UNC119Q13432 240 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 ZNF880Q6PDB4 577 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 FAM131AQ6UXB0 335 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 OR11H1Q8NG94 326 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 C12orf4Q9NQ89 552 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 RNF150Q9ULK6 438 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
RTN3-207ENST00000536011 TPRKBQ9Y3C4 175 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 WSB1Q9Y6I7 421 aa10.24□□□□□ -0.77
RTN3-207ENST00000536011 TRBV6-6A0A0A6YYG2 114 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 IGHV7-81A0A0B4J1V7 117 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 H7C2Y5 167 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
RTN3-207ENST00000536011 ZBTB25P24278 435 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 ECI1P42126 302 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 TMEM267Q0VDI3 215 aaPredicted RBP10.23□□□□□ -0.77
RTN3-207ENST00000536011 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
RTN3-207ENST00000536011 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 ZNF491Q8N8L2 437 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 OR1N2Q8NGR9 330 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 HSF4Q9ULV5 492 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 FOXA2Q9Y261 457 aaPredicted RBP10.23□□□□□ -0.77
RTN3-207ENST00000536011 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
RTN3-207ENST00000536011 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
RTN3-207ENST00000536011 G3V318 75 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 I3L521 148 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 SLC17A2O00624 439 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 RRHO14718 337 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 CD37P11049 281 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 CNTFRP26992 372 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 CD40LGP29965 261 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 RAB9AP51151 201 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 PSMD7P51665 324 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 HLA-DRB3P79483 266 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
RTN3-207ENST00000536011 QRFPP83859 136 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 RAB11BQ15907 218 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 ABHD5Q8WTS1 349 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 TMEM203Q969S6 136 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 RNF5Q99942 180 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 LPAR5Q9H1C0 372 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 ISYNA1Q9NPH2 558 aa10.22□□□□□ -0.77
RTN3-207ENST00000536011 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
RTN3-207ENST00000536011 H0YJW9 148 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 RGS10O43665 173 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 SPDEFO95238 335 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 HSMCR30P0CW71 290 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 CEACAM6P40199 344 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 CRIP2P52943 208 aaPredicted RBP10.21□□□□□ -0.77
RTN3-207ENST00000536011 TPBGQ13641 420 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 IRF3Q14653 427 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 P2RY14Q15391 338 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 RPL39P5Q59GN2 51 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 ZNF429Q86V71 674 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 RITA1Q96K30 269 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 PRR25Q96S07 402 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 TSNAXQ99598 290 aaKnown RBP10.21□□□□□ -0.77
RTN3-207ENST00000536011 KLK15Q9H2R5 256 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 KCNK15Q9H427 330 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 GNB4Q9HAV0 340 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 ZNF221Q9UK13 617 aa10.21□□□□□ -0.77
RTN3-207ENST00000536011 A0A1W2PN81 502 aa10.2□□□□□ -0.78
RTN3-207ENST00000536011 SOCS1O15524 211 aa10.2□□□□□ -0.78
RTN3-207ENST00000536011 LY86O95711 162 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms