RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 H3BUA1 57 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 RRHO14718 337 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 RAB29O14966 203 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 HSPA12AO43301 675 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SPDEFO95238 335 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 HSPB1P04792 205 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SAA2P0DJI9 122 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 CT45A6P0DMU7 189 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 CT45A5P0DMU8 189 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 CT45A7P0DMV0 189 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 GP9P14770 177 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SPNP16150 400 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 MYL12AP19105 171 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SMN1Q16637 294 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 C1orf100Q5SVJ3 147 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 RNLSQ5VYX0 342 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 OR4K15Q8NH41 348 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 NEK7Q8TDX7 302 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 FBLIM1Q8WUP2 373 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 NRG4Q8WWG1 115 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 FLYWCH2Q96CP2 140 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 TM2D1Q9BX74 207 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 MRPL20Q9BYC9 149 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 RIMS4Q9H426 269 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SMPD3Q9NY59 655 aaPredicted RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 SLC23A1Q9UHI7 598 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 RNF150Q9ULK6 438 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 FBXO7Q9Y3I1 522 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 WSB1Q9Y6I7 421 aa8.63□□□□□ -1.03
CLSTN3-206ENST00000535668 EFCAB10A6NFE3 127 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 LDLRAD4O15165 306 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 SLC2A2P11168 524 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 LYL1P12980 280 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 LRRC36Q1X8D7 754 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 IZUMO2Q6UXV1 221 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 MOB1BQ7L9L4 216 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 OR2AK2Q8NG84 335 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 OR10V1Q8NGI7 309 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 UBALD1Q8TB05 177 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 PHYHIPQ92561 330 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 MUL1Q969V5 352 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 ORAI1Q96D31 301 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 TMEM80Q96HE8 168 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 TMEM68Q96MH6 324 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 ASCL2Q99929 193 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 THAP7Q9BT49 309 aaPredicted RBP8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 SELENOIQ9C0D9 397 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 ZMAT4Q9H898 229 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 KIAA1456Q9P272 454 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 CLEC2DQ9UHP7 191 aa8.62□□□□□ -1.03
CLSTN3-206ENST00000535668 A6NHS1 94 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 H0YJW9 148 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 PROP1O75360 226 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 DIRAS3O95661 229 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 MAS1P04201 325 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 TFAP2AP05549 437 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 CNTFRP26992 372 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 MAPK3P27361 379 aaPredicted RBP8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 PPP1CCP36873 323 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 RPS27AP62979 156 aaKnown RBP8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 QRFPP83859 136 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 GNMTQ14749 295 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 TTC23Q5W5X9 447 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 AWAT2Q6E213 333 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 SVOPQ8N4V2 548 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 FAM89BQ8N5H3 189 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 OR52L2PQ8NGH6 319 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 OR13C5Q8NGS8 318 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 PARP11Q9NR21 331 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 MGAT4AQ9UM21 535 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 GAB2Q9UQC2 676 aa8.61□□□□□ -1.03
CLSTN3-206ENST00000535668 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 A0A087WW49 117 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 FCN1O00602 326 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 SAP30O75446 220 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 BPNT1O95861 308 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 MYF6P23409 242 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 OR3A3P47888 321 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 MECP2P51608 486 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 IL34Q6ZMJ4 242 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 JAGN1Q8N5M9 183 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 MS4A15Q8N5U1 240 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 KCNG3Q8TAE7 436 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 SULT4A1Q9BR01 284 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 YTHDF1Q9BYJ9 559 aaKnown RBP8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 STEAP1Q9UHE8 339 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 HSF4Q9ULV5 492 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 STUB1Q9UNE7 303 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
CLSTN3-206ENST00000535668 TRIM64CA6NLI5 447 aa8.59□□□□□ -1.03
CLSTN3-206ENST00000535668 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
CLSTN3-206ENST00000535668 TMEM14DPA8MWL7 114 aa8.59□□□□□ -1.03
CLSTN3-206ENST00000535668 SLC22A1O15245 554 aa8.59□□□□□ -1.03
CLSTN3-206ENST00000535668 CRTAPO75718 401 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms