RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	KRTDAP	P60985	99 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SELENOT	P62341	195 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RIG	Q13278	110 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SNAI3	Q3KNW1	292 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FOXB2	Q5VYV0	432 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	JPT1	Q9UK76	154 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IGKV3D-11	A0A0A0MRZ8	115 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CD59	P13987	128 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CEBPE	Q15744	281 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DSPP	Q9NZW4	1301 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	C11orf94	C9JXX5	98 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF708	P17019	499 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ATP5G2	Q06055	141 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IRF3	Q14653	427 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PRSS53	Q2L4Q9	553 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM91	Q6ZNR0	172 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	OR52M1	Q8NGK5	317 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RCC2	Q9P258	522 aa	Known RBP	13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FAM157C	P0CG43	387 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MFAP4	P55083	255 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NPVF	Q9HCQ7	196 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TDRD6	O60522	2096 aa	Known RBP	13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CEBPD	P49716	269 aa	Predicted RBP	13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	KLHDC1	Q8N7A1	406 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ARID1A	O14497	2285 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	HMSD	A8MTL9	139 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	EFNB2	P52799	333 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM78	Q5T7P6	136 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TEX261	Q6UWH6	196 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	OR2T10	Q8NGZ9	312 aa		13.52	□□□□□ -0.24
NCAPD3-213	ENST00000534532	XIRP1	Q702N8	1843 aa	Known RBP	13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGHV3OR16-10	A0A075B7F0	116 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FCN1	O00602	326 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SLC25A17	O43808	307 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CXorf1	O96002	111 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MGP	P08493	103 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZNF735	P0CB33	412 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PMCH	P20382	165 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SUCLG1	P53597	346 aa	Known RBP	13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	BSPH1	Q075Z2	132 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LY6D	Q14210	128 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RAX2	Q96IS3	184 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ARFGEF1	Q9Y6D6	1849 aa		13.52	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TRAV30	A0A087WSZ9	112 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MFSD2B	A6NFX1	497 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TGFA	P01135	160 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HCP5	Q6MZN7	132 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SLC35E3	Q7Z769	313 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGHM	P01871	453 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CECR9	P0C854	216 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	AMELY	Q99218	206 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SEC11C	Q9BY50	192 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	USF1	P22415	310 aa	Predicted RBP	13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PPOX	P50336	477 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZFP36L1	Q07352	338 aa	Known RBP	13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGSF11	Q5DX21	431 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MEGF10	Q96KG7	1140 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TLNRD1	Q9H1K6	362 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PARP14	Q460N5	1801 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SCMH1	Q96GD3	660 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	JMJD8	Q96S16	334 aa		13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.51	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NIN	Q8N4C6	2090 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TEX50	A0A1B0GTY4	177 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MED19	A0JLT2	244 aa	Predicted RBP	13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532		H0Y980	276 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR5AL1	P0C617	328 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM116	Q8NCL8	245 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PAXX	Q9BUH6	204 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGKV1D-42	A0A075B6H8	117 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SCT	P09683	121 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CD1B	P29016	333 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	WNT5A	P41221	380 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NHLH1	Q02575	133 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NHLH2	Q02577	135 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FDX2	Q6P4F2	183 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TRBV5-5	A0A0J9YX44	114 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR2A4	O95047	310 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FABP4	P15090	132 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FOSL1	P15407	271 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	COX19	Q49B96	90 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	UNQ9370/PRO34162	Q6UXP9	181 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR4C13	Q8NGP0	309 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR2A7	Q96R45	310 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LPAR5	Q9H1C0	372 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM56-RWDD3	S4R434	201 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FAM206A	Q9NX38	181 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	UMOD	P07911	640 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RNF212	Q495C1	297 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	VAX1	Q5SQQ9	334 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZNF738	Q8NE65	137 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	C2CD4C	Q8TF44	421 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NAT8	Q9UHE5	227 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MYO16	Q9Y6X6	1858 aa		13.5	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RBFOX3	A6NFN3	312 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RNFT1	Q5M7Z0	435 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SPANXN1	Q5VSR9	72 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms