RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SLC23A1Q9UHI7 598 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 MGAT4AQ9UM21 535 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 TRBV6-6A0A0A6YYG2 114 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 CNTFRP26992 372 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 CEACAM6P40199 344 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 VEGFCP49767 419 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 CLDN12P56749 244 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 FABP5Q01469 135 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 C2orf76Q3KRA6 126 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 IZUMO2Q6UXV1 221 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-211ENST00000533492 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 GHITMQ9H3K2 345 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 BLOC1S6Q9UL45 172 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 V9GY05 133 aa12.1□□□□□ -0.47
CPSF1-211ENST00000533492 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 HLA-DRB1P01911 266 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 GSTP1P09211 210 aaKnown RBP12.09□□□□□ -0.47
CPSF1-211ENST00000533492 ZBTB25P24278 435 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 HLA-DRB3P79483 266 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 CFHR3Q02985 330 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 FAM131AQ6UXB0 335 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 OR56B1Q8NGI3 324 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 EDARADDQ8WWZ3 215 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 FAM3DQ96BQ1 224 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 ABHD14BQ96IU4 210 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
CPSF1-211ENST00000533492 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 PARP11Q9NR21 331 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
CPSF1-211ENST00000533492 H7C2Y5 167 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 ATP6V0E1O15342 81 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 DENRO43583 198 aaKnown RBP12.08□□□□□ -0.48
CPSF1-211ENST00000533492 PSMB8P28062 276 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 MC5RP33032 325 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 TMEM50BP56557 158 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 MRPS15P82914 257 aaKnown RBP12.08□□□□□ -0.48
CPSF1-211ENST00000533492 PLGLAQ15195 96 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 HES5Q5TA89 166 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 NPBQ8NG41 125 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 PECRQ9BY49 303 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 Q9N2K0 584 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 RAB22AQ9UL26 194 aa12.08□□□□□ -0.48
CPSF1-211ENST00000533492 IGHV7-81A0A0B4J1V7 117 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 TRAV41A0A0B4J266 112 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 G3V318 75 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 PDCD5O14737 125 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 SCTP09683 121 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 CT45A6P0DMU7 189 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 CT45A5P0DMU8 189 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 CT45A7P0DMV0 189 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 TBCEQ15813 527 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-211ENST00000533492 GLDNQ6ZMI3 551 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-211ENST00000533492 ZNF367Q7RTV3 350 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 C4orf3Q8WVX3 66 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 PARP12Q9H0J9 701 aaKnown RBP12.07□□□□□ -0.48
CPSF1-211ENST00000533492 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
CPSF1-211ENST00000533492 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
CPSF1-211ENST00000533492 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
CPSF1-211ENST00000533492 NDUFA3O95167 84 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 CD3GP09693 182 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 MYL9P24844 172 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 PPIFP30405 207 aaKnown RBP12.06□□□□□ -0.48
CPSF1-211ENST00000533492 DGCR2P98153 550 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
CPSF1-211ENST00000533492 OR11H1Q8NG94 326 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 ZNF221Q9UK13 617 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 RNF150Q9ULK6 438 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 VSIG4Q9Y279 399 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 WASHC3Q9Y3C0 194 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 DNAH3Q8TD57 4116 aa12.06□□□□□ -0.48
CPSF1-211ENST00000533492 TMEM272A0A1B0GTI8 110 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 TRDCB7Z8K6 153 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 H0YJW9 148 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 RRHO14718 337 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 RBBP9O75884 186 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 ECSCRQ19T08 205 aa12.05□□□□□ -0.48
CPSF1-211ENST00000533492 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms